STRINGSTRING
CIRG_00263 CIRG_00263 CIRG_00022 CIRG_00022 CIRG_00988 CIRG_00988 CIRG_00277 CIRG_00277 CIRG_01156 CIRG_01156 CIRG_00397 CIRG_00397 CIRG_00702 CIRG_00702 CIRG_00251 CIRG_00251 CIRG_01859 CIRG_01859 CIRG_00401 CIRG_00401 CIRG_02030 CIRG_02030 CIRG_00531 CIRG_00531 CIRG_00145 CIRG_00145 CIRG_00250 CIRG_00250 CIRG_10044 CIRG_10044 CIRG_00290 CIRG_00290 CIRG_10064 CIRG_10064 CIRG_00876 CIRG_00876 CIRG_00565 CIRG_00565 CIRG_01749 CIRG_01749 CIRG_00780 CIRG_00780 CIRG_00835 CIRG_00835 CIRG_00935 CIRG_00935 CIRG_01609 CIRG_01609 CIRG_01298 CIRG_01298 CIRG_01803 CIRG_01803 CIRG_01667 CIRG_01667 CIRG_01717 CIRG_01717 CIRG_03334 CIRG_03334 CIRG_02262 CIRG_02262 CIRG_10071 CIRG_10071 CIRG_02406 CIRG_02406 CIRG_10306 CIRG_10306 CIRG_02631 CIRG_02631 CIRG_04297 CIRG_04297 CIRG_03402 CIRG_03402 CIRG_02831 CIRG_02831 CIRG_02866 CIRG_02866 CIRG_03612 CIRG_03612 CIRG_04562 CIRG_04562 CIRG_03021 CIRG_03021 CIRG_04667 CIRG_04667 CIRG_02720 CIRG_02720 CIRG_02740 CIRG_02740 CIRG_03081 CIRG_03081 CIRG_02830 CIRG_02830 CIRG_03116 CIRG_03116 CIRG_04727 CIRG_04727 CIRG_04006 CIRG_04006 CIRG_03155 CIRG_03155 CIRG_03160 CIRG_03160 CIRG_04122 CIRG_04122 CIRG_04152 CIRG_04152 CIRG_03486 CIRG_03486 CIRG_03400 CIRG_03400 CIRG_05537 CIRG_05537 CIRG_05572 CIRG_05572 CIRG_04616 CIRG_04616 CIRG_04065 CIRG_04065 CIRG_05902 CIRG_05902 CIRG_05942 CIRG_05942 CIRG_06032 CIRG_06032 CIRG_05036 CIRG_05036 CIRG_04115 CIRG_04115 CIRG_06133 CIRG_06133 CIRG_04475 CIRG_04475 CIRG_05190 CIRG_05190 CIRG_05415 CIRG_05415 CIRG_05349 CIRG_05349 CIRG_05364 CIRG_05364 CIRG_07111 CIRG_07111 CIRG_05475 CIRG_05475 CIRG_05530 CIRG_05530 CIRG_05509 CIRG_05509 CIRG_05615 CIRG_05615 CIRG_06251 CIRG_06251 CIRG_05705 CIRG_05705 CIRG_05835 CIRG_05835 CIRG_05860 CIRG_05860 CIRG_05819 CIRG_05819 CIRG_06135 CIRG_06135 CIRG_06395 CIRG_06395 CIRG_06635 CIRG_06635 CIRG_08332 CIRG_08332 CIRG_07446 CIRG_07446 CIRG_07546 CIRG_07546 CIRG_08577 CIRG_08577 CIRG_07090 CIRG_07090 CIRG_07125 CIRG_07125 CIRG_07181 CIRG_07181 CIRG_07230 CIRG_07230 CIRG_07315 CIRG_07315 CIRG_07399 CIRG_07399 CIRG_07615 CIRG_07615 CIRG_08206 CIRG_08206 CIRG_08216 CIRG_08216 CIRG_07935 CIRG_07935 CIRG_08571 CIRG_08571 CIRG_08576 CIRG_08576 CIRG_07893 CIRG_07893 CIRG_08771 CIRG_08771 CIRG_08440 CIRG_08440 CIRG_08570 CIRG_08570 CIRG_08429 CIRG_08429 CIRG_08569 CIRG_08569 CIRG_08604 CIRG_08604 CIRG_08845 CIRG_08845 CIRG_09278 CIRG_09278 CIRG_09202 CIRG_09202 CIRG_09272 CIRG_09272 CIRG_09156 CIRG_09156 CIRG_00059 CIRG_00059 CIRG_00139 CIRG_00139 CIRG_00220 CIRG_00220 CIRG_00264 CIRG_00264 CIRG_00414 CIRG_00414 CIRG_00494 CIRG_00494 CIRG_00884 CIRG_00884 CIRG_01192 CIRG_01192 CIRG_01547 CIRG_01547 CIRG_01582 CIRG_01582 CIRG_01861 CIRG_01861 CIRG_02041 CIRG_02041 CIRG_10185 CIRG_10185 CIRG_10310 CIRG_10310 CIRG_02819 CIRG_02819 CIRG_03094 CIRG_03094 CIRG_03339 CIRG_03339 CIRG_03524 CIRG_03524 CIRG_03998 CIRG_03998 CIRG_04023 CIRG_04023 CIRG_04668 CIRG_04668 CIRG_04983 CIRG_04983 CIRG_05108 CIRG_05108 CIRG_05268 CIRG_05268 CIRG_05538 CIRG_05538 CIRG_05818 CIRG_05818 CIRG_06103 CIRG_06103 CIRG_06332 CIRG_06332 CIRG_06428 CIRG_06428 CIRG_06548 CIRG_06548 CIRG_06763 CIRG_06763 CIRG_07263 CIRG_07263 CIRG_07403 CIRG_07403 CIRG_08553 CIRG_08553 CIRG_08558 CIRG_08558 CIRG_08678 CIRG_08678 CIRG_08763 CIRG_08763 CIRG_08783 CIRG_08783 CIRG_09642 CIRG_09642 CIRG_09000 CIRG_09000
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CIRG_00263Uncharacterized protein. (408 aa)
CIRG_00022Cyclin-dependent kinase E-1. (467 aa)
CIRG_00988Membrane-associated tyrosine. (913 aa)
CIRG_00277Cyclin-C; Belongs to the cyclin family. (303 aa)
CIRG_01156Transcription factor TFIID complex subunit Taf111. (1080 aa)
CIRG_00397RNA-dependent RNA polymerase. (1403 aa)
CIRG_00702DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (146 aa)
CIRG_00251DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1385 aa)
CIRG_01859Uncharacterized protein. (911 aa)
CIRG_00401DNA polymerase. (1679 aa)
CIRG_02030Uncharacterized protein. (386 aa)
CIRG_00531Uncharacterized protein. (443 aa)
CIRG_00145Protein kinase domain-containing protein. (384 aa)
CIRG_00250Uncharacterized protein. (354 aa)
CIRG_10044AMPKBI domain-containing protein. (452 aa)
CIRG_00290RevA. (310 aa)
CIRG_10064RNA_pol_L_2 domain-containing protein. (145 aa)
CIRG_00876DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (129 aa)
CIRG_00565Uncharacterized protein. (559 aa)
CIRG_01749Uncharacterized protein. (79 aa)
CIRG_00780DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (121 aa)
CIRG_00835SGNH_hydro domain-containing protein. (264 aa)
CIRG_00935Uncharacterized protein. (881 aa)
CIRG_01609UmuC domain-containing protein. (648 aa)
CIRG_01298Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. (908 aa)
CIRG_01803Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (285 aa)
CIRG_01667Saccharopine dehydrogenase. (401 aa)
CIRG_01717RNA polymerase II transcription factor. (637 aa)
CIRG_03334Cell division protein kinase 9-A. (1106 aa)
CIRG_02262Beclin-1. (530 aa)
CIRG_10071RNA-dependent RNA polymerase. (1195 aa)
CIRG_02406Uncharacterized protein. (211 aa)
CIRG_10306RNA polymerase II transcription factor B subunit 5. (72 aa)
CIRG_02631Cyclin. (722 aa)
CIRG_04297DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (362 aa)
CIRG_03402TATA binding protein-associated factor. (446 aa)
CIRG_02831Uncharacterized protein. (653 aa)
CIRG_02866Cyclin-dependent protein kinase regulator; Belongs to the cyclin family. (425 aa)
CIRG_03612Phosphatidylinositol 3-kinase VPS34. (903 aa)
CIRG_04562Negative regulator of the PHO system; Belongs to the protein kinase superfamily. (330 aa)
CIRG_03021Tetratricopeptide repeat protein 1. (1210 aa)
CIRG_04667Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (772 aa)
CIRG_02720Cyclin-dependent protein kinase regulator. (299 aa)
CIRG_02740Uncharacterized protein. (177 aa)
CIRG_03081DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1197 aa)
CIRG_02830DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (252 aa)
CIRG_03116General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (471 aa)
CIRG_04727DNA-directed RNA polymerases I. (167 aa)
CIRG_04006Uncharacterized protein. (269 aa)
CIRG_03155Serine/threonine-protein kinase bur-1. (538 aa)
CIRG_03160Nucleosome assembly protein; Belongs to the nucleosome assembly protein (NAP) family. (409 aa)
CIRG_04122DNA-directed RNA polymerase II subunit RPB7. (169 aa)
CIRG_04152Uncharacterized protein. (481 aa)
CIRG_03486RNA-dependent RNA polymerase. (1372 aa)
CIRG_03400Transcription factor TFIID complex subunit Taf11. (414 aa)
CIRG_05537Uncharacterized protein. (164 aa)
CIRG_05572Cyclin pho85 family protein. (498 aa)
CIRG_04616Transcription initiation factor TFIID subunit 5. (750 aa)
CIRG_04065Ski8. (308 aa)
CIRG_05902Uncharacterized protein. (194 aa)
CIRG_05942DNA polymerase. (1463 aa)
CIRG_06032RNA polymerase II accessory factor. (511 aa)
CIRG_05036Uncharacterized protein. (718 aa)
CIRG_04115TATA-binding protein associated factor Taf2. (1253 aa)
CIRG_06133G1/S-specific cyclin CLN1; Belongs to the cyclin family. (425 aa)
CIRG_04475DNA-directed RNA polymerases I and III subunit RPAC1. (382 aa)
CIRG_05190CID domain-containing protein. (238 aa)
CIRG_05415Plus3 domain-containing protein. (622 aa)
CIRG_05349DNA primase; Belongs to the eukaryotic-type primase small subunit family. (481 aa)
CIRG_05364DNA-directed RNA polymerases N/8 kDa subunit superfamily protein. (74 aa)
CIRG_07111DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1750 aa)
CIRG_05475TAF8_C domain-containing protein. (334 aa)
CIRG_05530DNA-directed RNA polymerase II. (128 aa)
CIRG_05509Serine/threonine-protein kinase crk1; Belongs to the protein kinase superfamily. (412 aa)
CIRG_05615DNA polymerase subunit delta-2. (584 aa)
CIRG_06251Amino-acid acetyltransferase, mitochondrial; N-acetylglutamate synthase involved in arginine biosynthesis. Belongs to the acetyltransferase family. (737 aa)
CIRG_05705Uncharacterized protein. (653 aa)
CIRG_05835RPA43_OB domain-containing protein. (385 aa)
CIRG_05860DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1258 aa)
CIRG_05819Uncharacterized protein. (260 aa)
CIRG_06135Acyl_transf_3 domain-containing protein. (206 aa)
CIRG_06395BZIP transcription factor HacA. (437 aa)
CIRG_06635Transcription initiation factor IIF subunit beta. (382 aa)
CIRG_08332DUF4211 domain-containing protein. (531 aa)
CIRG_07446Cyclin-L2; Belongs to the cyclin family. (380 aa)
CIRG_07546Uncharacterized protein. (606 aa)
CIRG_08577NAD kinase /ATP NAD kinase. (206 aa)
CIRG_07090ISWI chromatin-remodeling complex ATPase ISW2. (964 aa)
CIRG_07125Uncharacterized protein. (389 aa)
CIRG_07181RNA polymerase II transcription factor. (284 aa)
CIRG_07230DNA-directed RNA polymerases I. (236 aa)
CIRG_07315Signal transduction histidine-protein kinase barA. (2341 aa)
CIRG_07399Ribose-phosphate pyrophosphokinase II. (454 aa)
CIRG_07615DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
CIRG_08206DNA_pol_E_B domain-containing protein. (742 aa)
CIRG_08216CBFD_NFYB_HMF domain-containing protein. (266 aa)
CIRG_07935CBS domain containing protein. (344 aa)
CIRG_08571Uncharacterized protein. (309 aa)
CIRG_08576NAD kinase /ATP NAD kinase. (281 aa)
CIRG_07893AMPK1_CBM domain-containing protein. (561 aa)
CIRG_08771Polyphosphoinositide phosphatase. (1023 aa)
CIRG_08440RNA polymerase II transcription factor B subunit 4. (396 aa)
CIRG_08570Uncharacterized protein. (392 aa)
CIRG_08429Uncharacterized protein. (342 aa)
CIRG_08569Glyoxalase-II. (245 aa)
CIRG_08604DNA polymerase gamma. (1142 aa)
CIRG_08845Uncharacterized protein. (536 aa)
CIRG_09278Cyclin-dependent protein kinase regulator Pho80. (393 aa)
CIRG_09202Transcription factor TFIID complex subunit Taf7. (511 aa)
CIRG_09272Cyclin N-terminal domain-containing protein. (403 aa)
CIRG_09156DNA-directed RNA polymerase II subunit RPB4. (149 aa)
CIRG_00059RNA polymerase II elongator complex subunit. (421 aa)
CIRG_00139NAD kinase /ATP NAD kinase. (688 aa)
CIRG_00220Phosphoinositide 3-kinase regulatory subunit 4. (1624 aa)
CIRG_00264Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
CIRG_00414Med12 domain-containing protein. (1554 aa)
CIRG_00494Transcription initiation factor TFIID subunit 12. (625 aa)
CIRG_00884HTH TFE/IIEalpha-type domain-containing protein. (436 aa)
CIRG_01192DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1166 aa)
CIRG_01547Bromodomain associated domain containing protein. (214 aa)
CIRG_01582Ribose-phosphate pyrophosphokinase. (320 aa)
CIRG_01861DNA repair and recombination protein RAD54. (801 aa)
CIRG_02041DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2223 aa)
CIRG_10185Protein kinase domain-containing protein. (375 aa)
CIRG_10310Uncharacterized protein. (112 aa)
CIRG_02819Uncharacterized protein. (479 aa)
CIRG_03094RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (653 aa)
CIRG_03339TFIIH basal transcription factor complex helicase XPB subunit. (750 aa)
CIRG_03524NFX1-type zinc finger-containing protein 1. (1106 aa)
CIRG_03998Uncharacterized protein. (247 aa)
CIRG_04023Uncharacterized protein. (468 aa)
CIRG_04668DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (502 aa)
CIRG_04983DNA-directed RNA polymerase II subunit RPB3. (345 aa)
CIRG_05108Uncharacterized protein. (326 aa)
CIRG_05268Ribose-phosphate pyrophosphokinase 1. (509 aa)
CIRG_05538Uncharacterized protein. (357 aa)
CIRG_05818Uncharacterized protein. (108 aa)
CIRG_06103FYVE finger-containing phosphoinositide kinase. (2531 aa)
CIRG_06332RNA polymerase II transcription factor B subunit 3. (395 aa)
CIRG_06428Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (710 aa)
CIRG_06548RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (487 aa)
CIRG_06763ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (809 aa)
CIRG_07263DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1690 aa)
CIRG_07403Uncharacterized protein. (221 aa)
CIRG_08553Negative regulator of the PHO system; Belongs to the protein kinase superfamily. (312 aa)
CIRG_08558DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (657 aa)
CIRG_08678UV radiation resistance-associated gene protein. (641 aa)
CIRG_08763Uncharacterized protein. (451 aa)
CIRG_08783DNA polymerase. (1110 aa)
CIRG_09642Uncharacterized protein. (508 aa)
CIRG_09000Dna-directed rna polymerase iii subunit. (195 aa)
Your Current Organism:
Coccidioides immitis RMSCC2394
NCBI taxonomy Id: 404692
Other names: C. immitis RMSCC 2394, Coccidioides immitis RMSCC 2394
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