STRINGSTRING
CIRG_01807 CIRG_01807 CIRG_04976 CIRG_04976 CIRG_04975 CIRG_04975 CIRG_05989 CIRG_05989 CIRG_06224 CIRG_06224 CIRG_07745 CIRG_07745 CIRG_08123 CIRG_08123 CIRG_08154 CIRG_08154 CIRG_04662 CIRG_04662
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CIRG_01807HAD-superfamily protein phosphatase subfamily protein IIIC. (246 aa)
CIRG_04976Uncharacterized protein. (722 aa)
CIRG_04975Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (112 aa)
CIRG_05989U-box domain-containing protein. (284 aa)
CIRG_06224Vacuolar protein-sorting protein bro1. (979 aa)
CIRG_07745Ubiquitin. (192 aa)
CIRG_08123pH-response regulator protein palA/RIM20. (505 aa)
CIRG_08154BZIP domain-containing protein. (325 aa)
CIRG_04662UDP-N-acetylglucosaminyltransferase. (1676 aa)
Your Current Organism:
Coccidioides immitis RMSCC2394
NCBI taxonomy Id: 404692
Other names: C. immitis RMSCC 2394, Coccidioides immitis RMSCC 2394
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