STRINGSTRING
SDG06258.1 SDG06258.1 SDG06281.1 SDG06281.1 SDG81522.1 SDG81522.1 SDG81563.1 SDG81563.1 SDG89932.1 SDG89932.1 SDG89967.1 SDG89967.1 SDG97455.1 SDG97455.1 SDG97482.1 SDG97482.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDG06258.1TonB-linked outer membrane protein, SusC/RagA family. (1055 aa)
SDG06281.1SusD family protein. (496 aa)
SDG81522.1SusD family protein. (455 aa)
SDG81563.1TonB-linked outer membrane protein, SusC/RagA family. (1002 aa)
SDG89932.1TonB-linked outer membrane protein, SusC/RagA family. (1073 aa)
SDG89967.1SusD family protein. (512 aa)
SDG97455.1TonB-linked outer membrane protein, SusC/RagA family. (1009 aa)
SDG97482.1Starch-binding associating with outer membrane. (541 aa)
Your Current Organism:
Pedobacter terrae
NCBI taxonomy Id: 405671
Other names: DSM 17933, KCTC 12762, Pedobacter sp. DS-57, Pedobacter terrae Yoon et al. 2007, strain DS-57
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