Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SMC48507.1 | SMC84960.1 | SAMN05660733_00032 | SAMN05660733_02087 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Probable phosphomutase, MSMEG_4193 family. | 0.413 |
| SMC48507.1 | SMD11845.1 | SAMN05660733_00032 | SAMN05660733_04325 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.733 |
| SMC48507.1 | SMD19722.1 | SAMN05660733_00032 | SAMN05660733_05614 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine phosphatase. | 0.462 |
| SMC48507.1 | SMD21295.1 | SAMN05660733_00032 | SAMN05660733_06248 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | HAD-superfamily subfamily IB hydrolase, TIGR01490. | 0.440 |
| SMC48507.1 | SMD23628.1 | SAMN05660733_00032 | SAMN05660733_07312 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Broad specificity phosphatase PhoE; Belongs to the phosphoglycerate mutase family. | 0.698 |
| SMC48507.1 | SMD24024.1 | SAMN05660733_00032 | SAMN05660733_07555 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Histidine phosphatase superfamily (branch 1). | 0.698 |
| SMC48507.1 | SMD24116.1 | SAMN05660733_00032 | SAMN05660733_07589 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. | 0.698 |
| SMC48507.1 | glyA | SAMN05660733_00032 | SAMN05660733_03979 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.435 |
| SMC48507.1 | glyA-2 | SAMN05660733_00032 | SAMN05660733_04439 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.435 |
| SMC48507.1 | gpmA | SAMN05660733_00032 | SAMN05660733_03731 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.746 |
| SMC48507.1 | mdh | SAMN05660733_00032 | SAMN05660733_01024 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.501 |
| SMC48507.1 | serC | SAMN05660733_00032 | SAMN05660733_06795 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.964 |
| SMC48630.1 | SMC81894.1 | SAMN05660733_00048 | SAMN05660733_01859 | Glutamate synthase conserved region-containing protein. | Iron-binding zinc finger CDGSH type. | 0.458 |
| SMC48630.1 | glyA | SAMN05660733_00048 | SAMN05660733_03979 | Glutamate synthase conserved region-containing protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.420 |
| SMC48630.1 | glyA-2 | SAMN05660733_00048 | SAMN05660733_04439 | Glutamate synthase conserved region-containing protein. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.420 |
| SMC48630.1 | mdh | SAMN05660733_00048 | SAMN05660733_01024 | Glutamate synthase conserved region-containing protein. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.587 |
| SMC49305.1 | mdh | SAMN05660733_00093 | SAMN05660733_01024 | Molydopterin dinucleotide binding domain-containing protein. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.749 |
| SMC52265.1 | SMC97075.1 | SAMN05660733_00242 | SAMN05660733_03084 | Pyruvate, water dikinase. | Fructose-bisphosphate aldolase, class II. | 0.712 |
| SMC52265.1 | SMD07851.1 | SAMN05660733_00242 | SAMN05660733_03941 | Pyruvate, water dikinase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.721 |
| SMC52265.1 | eno | SAMN05660733_00242 | SAMN05660733_07391 | Pyruvate, water dikinase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.744 |
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