STRINGSTRING
KPH78214.1 KPH78214.1 KPH75154.1 KPH75154.1 KPH74546.1 KPH74546.1 KPH74472.1 KPH74472.1 KPH73965.1 KPH73965.1 KPH73494.1 KPH73494.1 KPH72781.1 KPH72781.1 speE speE KPH72632.1 KPH72632.1 KPH72633.1 KPH72633.1 speH speH KPH71543.1 KPH71543.1 KPH71546.1 KPH71546.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KPH78214.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. (267 aa)
KPH75154.1Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
KPH74546.1Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (522 aa)
KPH74472.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
KPH73965.1Arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
KPH73494.1GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
KPH72781.1Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. (290 aa)
speESpermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (275 aa)
KPH72632.1Agmatinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family. (318 aa)
KPH72633.1Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (469 aa)
speHS-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (126 aa)
KPH71543.1Lysine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
KPH71546.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa)
Your Current Organism:
Oceanobacillus caeni
NCBI taxonomy Id: 405946
Other names: CCUG 53534, CIP 109363, KCTC 13061, O. caeni, Oceanobacillus caeni Nam et al. 2008, Oceanobacillus sp. MN1SW8a, Oceanobacillus sp. S-11, strain S-11
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