STRINGSTRING
GCA_000934765_01058 GCA_000934765_01058 GCA_000934765_01436 GCA_000934765_01436 GCA_000934765_02480 GCA_000934765_02480 GCA_000934765_02606 GCA_000934765_02606 GCA_000934765_02607 GCA_000934765_02607
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000934765_01058Unannotated protein. (577 aa)
GCA_000934765_01436Unannotated protein. (863 aa)
GCA_000934765_02480Unannotated protein. (330 aa)
GCA_000934765_02606Unannotated protein. (289 aa)
GCA_000934765_02607Unannotated protein. (341 aa)
Your Current Organism:
Thiomicrospira microaerophila
NCBI taxonomy Id: 406020
Other names: DSM 17327, T. microaerophila, Thioalkalimicrobium microaerophilum, Thioalkalimicrobium microaerophilum Sorokin et al. 2007, Thiomicrospira microaerophila (Sorokin et al. 2007) Boden et al. 2017, UNIQEM U242, gamma proteobacterium ASL8.2, strain ASL8-2
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