STRINGSTRING
XNC1_0647 XNC1_0647 XNC1_1475 XNC1_1475 XNC1_1478 XNC1_1478 XNC1_1561 XNC1_1561 xcnL xcnL xcnK xcnK xcnI xcnI xcnH xcnH xcnF xcnF XNC1_1756 XNC1_1756 XNC1_1759 XNC1_1759 XNC1_1762 XNC1_1762 XNC1_1763 XNC1_1763 XNC1_2022 XNC1_2022 XNC1_2038 XNC1_2038 XNC1_2040 XNC1_2040 XNC1_2156 XNC1_2156 XNC1_2157 XNC1_2157 XNC1_2161 XNC1_2161 XNC1_2162 XNC1_2162 XNC1_2268 XNC1_2268 XNC1_2269 XNC1_2269 XNC1_2299 XNC1_2299 XNC1_2463 XNC1_2463 XNC1_2464 XNC1_2464 XNC1_2465 XNC1_2465 XNC1_2466 XNC1_2466 XNC1_2467 XNC1_2467 XNC1_2713 XNC1_2713 XNC1_2781 XNC1_2781 XNC1_2782 XNC1_2782
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XNC1_0647Conserved hypothetical protein. (60 aa)
XNC1_1475Non-ribosomal peptide synthetase; Function of strongly homologous gene; enzyme. (734 aa)
XNC1_1478Hypothetical protein. (217 aa)
XNC1_1561Putative Nonribosomal peptide synthase (NRPS); Belongs to the ATP-dependent AMP-binding enzyme family. (1019 aa)
xcnLPolyketide synthase involved in xenocoumacin synthesis; Function experimentally demonstrated in the studied strain; enzyme. (1487 aa)
xcnKNon-ribosomal peptide synthase involved in xenocoumacin synthesis; Function experimentally demonstrated in the studied strain; enzyme. (857 aa)
xcnIThioesterase involved in xenocoumacin synthesis; Function experimentally demonstrated in the studied strain; enzyme. (243 aa)
xcnHPolyketide synthase involved in xenocoumacin synthesis; Function experimentally demonstrated in the studied strain; enzyme. (1927 aa)
xcnFPolyketide synthase involved in xenocoumacin synthesis; Function experimentally demonstrated in the studied strain; enzyme. (3421 aa)
XNC1_1756Putative polyketide synthase pksJ (PKS); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (2344 aa)
XNC1_1759Putative Oleoyl-[acyl-carrier-protein] hydrolase. (203 aa)
XNC1_1762Putative Phenylalanine racemase (ATP-hydrolyzing); Belongs to the ATP-dependent AMP-binding enzyme family. (2302 aa)
XNC1_1763Putative Phenylalanine racemase (ATP-hydrolyzing). (2396 aa)
XNC1_2022Non Ribosomal peptide synthetase (-succinylbenzoate--CoA ligase); Function of strongly homologous gene; enzyme. (4138 aa)
XNC1_2038Non-ribosomal peptide synthetase; Function of strongly homologous gene; enzyme. (5994 aa)
XNC1_2040Putative Phenylalanine racemase (ATP-hydrolyzing). (5480 aa)
XNC1_2156Long-chain-fatty-acid--CoA ligase (polyketide synthase); Function of strongly homologous gene; enzyme. (1644 aa)
XNC1_2157Phenylalanine racemase (ATP-hydrolyzing)(polyketide synthase); Function of strongly homologous gene; enzyme. (1893 aa)
XNC1_2161Putative Phenylalanine racemase (ATP-hydrolyzing). (1102 aa)
XNC1_2162Thioesterase (fragment). (174 aa)
XNC1_2268Hypothetical protein. (102 aa)
XNC1_2269Hypothetical protein. (157 aa)
XNC1_2299Putative Peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (2000 aa)
XNC1_2463Putative transport proteins (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal)). (542 aa)
XNC1_2464Putative Phenylalanine racemase (ATP-hydrolyzing). (3642 aa)
XNC1_2465Conserved hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. (1138 aa)
XNC1_2466Putative Ornithine racemase. (3279 aa)
XNC1_2467Putative Ornithine racemase. (2773 aa)
XNC1_2713Putative Non-ribosomal peptide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (4949 aa)
XNC1_2781Peptide synthetase XpsB. (3592 aa)
XNC1_2782Peptide synthetase XpsB. (3326 aa)
Your Current Organism:
Xenorhabdus nematophila
NCBI taxonomy Id: 406817
Other names: X. nematophila ATCC 19061, Xenorhabdus nematophila ATCC 19061, Xenorhabdus nematophila str. ATCC 19061, Xenorhabdus nematophila strain ATCC 19061
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