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rfaD rfaD rfaF rfaF rfaC rfaC XNC1_0159 XNC1_0159 rfaQ rfaQ XNC1_0168 XNC1_0168 XNC1_0169 XNC1_0169 XNC1_0170 XNC1_0170 XNC1_0171 XNC1_0171 XNC1_0172 XNC1_0172 lpcA lpcA gmhB gmhB rfaE rfaE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rfaDADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. (312 aa)
rfaFADP-heptose; LPS heptosyltransferase II. (350 aa)
rfaCADP-heptose; LPS heptosyl transferase I. (325 aa)
XNC1_0159Lipopolysaccharide core biosynthesis protein RfaG (Glucosyltransferase I). (376 aa)
rfaQLipopolysaccharide core biosynthesis; modification of heptose region of core. (354 aa)
XNC1_0168O-antigen ligase (fragment). (262 aa)
XNC1_0169WalM protein. (392 aa)
XNC1_0170WalN protein. (367 aa)
XNC1_0171WalO protein. (334 aa)
XNC1_0172WalR protein. (372 aa)
lpcAD-sedoheptulose 7-phosphate isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (193 aa)
gmhBD,D-heptose 1,7-bisphosphate phosphatase. (188 aa)
rfaEPutative bifunctional ADP-L-glycero-D-manno-heptose synthase: putaive kinase (N-terminal); Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. (474 aa)
Your Current Organism:
Xenorhabdus nematophila
NCBI taxonomy Id: 406817
Other names: X. nematophila ATCC 19061, Xenorhabdus nematophila ATCC 19061, Xenorhabdus nematophila str. ATCC 19061, Xenorhabdus nematophila strain ATCC 19061
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