STRINGSTRING
rfaF rfaF rfaC rfaC XNC1_0159 XNC1_0159 rfaQ rfaQ XNC1_0168 XNC1_0168
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rfaFADP-heptose; LPS heptosyltransferase II. (350 aa)
rfaCADP-heptose; LPS heptosyl transferase I. (325 aa)
XNC1_0159Lipopolysaccharide core biosynthesis protein RfaG (Glucosyltransferase I). (376 aa)
rfaQLipopolysaccharide core biosynthesis; modification of heptose region of core. (354 aa)
XNC1_0168O-antigen ligase (fragment). (262 aa)
Your Current Organism:
Xenorhabdus nematophila
NCBI taxonomy Id: 406817
Other names: X. nematophila ATCC 19061, Xenorhabdus nematophila ATCC 19061, Xenorhabdus nematophila str. ATCC 19061, Xenorhabdus nematophila strain ATCC 19061
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