STRINGSTRING
XNC1_1248 XNC1_1248 XNC1_1249 XNC1_1249 XNC1_1680 XNC1_1680 XNC1_1681 XNC1_1681 XNC1_2093 XNC1_2093 XNC1_2094 XNC1_2094 XNC1_2095 XNC1_2095 XNC1_2096 XNC1_2096 XNC1_2097 XNC1_2097 XNC1_2098 XNC1_2098 XNC1_2099 XNC1_2099 XNC1_2977 XNC1_2977 XNC1_2978 XNC1_2978
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XNC1_1248Hypothetical protein; putative membrane protein. (418 aa)
XNC1_1249Hypothetical protein. (53 aa)
XNC1_1680Hypothetical protein. (77 aa)
XNC1_1681Conserved hypothetical protein. (245 aa)
XNC1_2093Transposase (fragment). (174 aa)
XNC1_2094Transposase (fragment). (98 aa)
XNC1_2095Transposase (fragment). (55 aa)
XNC1_2096Complete genome; segment 8/17. (210 aa)
XNC1_2097Putative deaminase protein with metallo-dependent hydrolase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (387 aa)
XNC1_2098Transposase. (294 aa)
XNC1_2099Putative protein with metallo-dependent hydrolase domain, commonly a deaminase (fragment). (89 aa)
XNC1_2977LuxR-family transcriptional regulator. (231 aa)
XNC1_2978Permease. (428 aa)
Your Current Organism:
Xenorhabdus nematophila
NCBI taxonomy Id: 406817
Other names: X. nematophila ATCC 19061, Xenorhabdus nematophila ATCC 19061, Xenorhabdus nematophila str. ATCC 19061, Xenorhabdus nematophila strain ATCC 19061
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