12 items (Xenorhabdus nematophila) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	XNC1_2091	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (115 aa)
	XNC1_2539	Putative invasin (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (85 aa)
	XNC1_2540	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (119 aa)
	XNC1_2932	Conserved hypothetical protein. (1327 aa)
	XNC1_3019	Conserved hypothetical protein. (82 aa)
	XNC1_3199	Hypothetical protein. (122 aa)
	XNC1_3200	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (115 aa)
	XNC1_3201	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (58 aa)
	XNC1_3339	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (538 aa)
	XNC1_3824	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (122 aa)
	XNC1_3825	Hypothetical protein. (115 aa)
	XNC1_3826	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (55 aa)

Your Current Organism:

Xenorhabdus nematophila

NCBI taxonomy Id: 406817
Other names: X. nematophila ATCC 19061, Xenorhabdus nematophila ATCC 19061, Xenorhabdus nematophila str. ATCC 19061, Xenorhabdus nematophila strain ATCC 19061

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
XNC1_2091	XNC1_2539	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative invasin (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.774
XNC1_2091	XNC1_3019	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Conserved hypothetical protein.	0.774
XNC1_2539	XNC1_2091	Putative invasin (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.774
XNC1_2539	XNC1_2540	Putative invasin (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.773
XNC1_2539	XNC1_3200	Putative invasin (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.774
XNC1_2539	XNC1_3825	Putative invasin (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Hypothetical protein.	0.774
XNC1_2540	XNC1_2539	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative invasin (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.773
XNC1_3019	XNC1_2091	Conserved hypothetical protein.	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.774
XNC1_3019	XNC1_3200	Conserved hypothetical protein.	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.774
XNC1_3019	XNC1_3825	Conserved hypothetical protein.	Hypothetical protein.	0.774
XNC1_3199	XNC1_3200	Hypothetical protein.	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.773
XNC1_3199	XNC1_3201	Hypothetical protein.	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.746
XNC1_3200	XNC1_2539	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative invasin (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.774
XNC1_3200	XNC1_3019	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Conserved hypothetical protein.	0.774
XNC1_3200	XNC1_3199	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Hypothetical protein.	0.773
XNC1_3200	XNC1_3201	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.746
XNC1_3201	XNC1_3199	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Hypothetical protein.	0.746
XNC1_3201	XNC1_3200	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.746
XNC1_3824	XNC1_3825	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Hypothetical protein.	0.773
XNC1_3824	XNC1_3826	Putative transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.746

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