STRINGSTRING
XNC1_1454 XNC1_1454 XNC1_2221 XNC1_2221 XNC1_2222 XNC1_2222 XNC1_3899 XNC1_3899 XNC1_3900 XNC1_3900 XNC1_4226 XNC1_4226 XNC1_4227 XNC1_4227 XNC1_4467 XNC1_4467 XNC1_4468 XNC1_4468 XNC1_4470 XNC1_4470 XNC1_4628 XNC1_4628 XNC1_4629 XNC1_4629 XNC1_4630 XNC1_4630
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
XNC1_1454Putative ABC-type transport system. (92 aa)
XNC1_2221Conserved hypothetical protein. (90 aa)
XNC1_2222Conserved hypothetical protein. (162 aa)
XNC1_3899Conserved hypothetical protein. (170 aa)
XNC1_3900Conserved hypothetical protein. (97 aa)
XNC1_4226Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (98 aa)
XNC1_4227Hypothetical protein; No homology to any previously reported sequences. (57 aa)
XNC1_4467Hypothetical protein. (74 aa)
XNC1_4468Hypothetical protein. (88 aa)
XNC1_4470Hypothetical protein. (43 aa)
XNC1_4628Hypothetical protein. (134 aa)
XNC1_4629Conserved hypothetical protein. (92 aa)
XNC1_4630Conserved hypothetical protein. (166 aa)
Your Current Organism:
Xenorhabdus nematophila
NCBI taxonomy Id: 406817
Other names: X. nematophila ATCC 19061, Xenorhabdus nematophila ATCC 19061, Xenorhabdus nematophila str. ATCC 19061, Xenorhabdus nematophila strain ATCC 19061
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