Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XNC1_0012 | fadH | XNC1_0012 | XNC1_4145 | Putative monooxygenase, flavin-binding family. | 2,4-dienoyl-CoA reductase, NADH and FMN-linked. | 0.464 |
| XNC1_0245 | XNC1_0246 | XNC1_0245 | XNC1_0246 | Putative peptide monooxygenase. | Putative Sarcosine oxidase. | 0.775 |
| XNC1_0246 | XNC1_0245 | XNC1_0246 | XNC1_0245 | Putative Sarcosine oxidase. | Putative peptide monooxygenase. | 0.775 |
| XNC1_2274 | XNC1_3619 | XNC1_2274 | XNC1_3619 | FAD dependent oxidoreductase; Function of strongly homologous gene; enzyme. | Putative oxidoreductase with FAD/NAD(P)-binding domain. | 0.928 |
| XNC1_3619 | XNC1_2274 | XNC1_3619 | XNC1_2274 | Putative oxidoreductase with FAD/NAD(P)-binding domain. | FAD dependent oxidoreductase; Function of strongly homologous gene; enzyme. | 0.928 |
| dadA | sthA | XNC1_2513 | XNC1_0273 | D-amino acid dehydrogenase subunit; Oxidative deamination of D-amino acids. | Soluble pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.441 |
| fadH | XNC1_0012 | XNC1_4145 | XNC1_0012 | 2,4-dienoyl-CoA reductase, NADH and FMN-linked. | Putative monooxygenase, flavin-binding family. | 0.464 |
| fadH | gor | XNC1_4145 | XNC1_4315 | 2,4-dienoyl-CoA reductase, NADH and FMN-linked. | Glutathione oxidoreductase, nucleotide-binding. | 0.439 |
| fadH | lpd | XNC1_4145 | XNC1_1082 | 2,4-dienoyl-CoA reductase, NADH and FMN-linked. | Dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes. | 0.439 |
| fadH | sthA | XNC1_4145 | XNC1_0273 | 2,4-dienoyl-CoA reductase, NADH and FMN-linked. | Soluble pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.439 |
| fadH | trxB | XNC1_4145 | XNC1_1547 | 2,4-dienoyl-CoA reductase, NADH and FMN-linked. | Thioredoxin reductase, FAD/NAD(P)-binding. | 0.517 |
| frdA | glpD | XNC1_0638 | XNC1_4469 | Fumarate reductase, anaerobic, catalytic and NAD/flavoprotein subunit. | Sn-glycerol-3-phosphate dehydrogenase FAD/NAD(P)-binding (aerobic); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.574 |
| frdA | sdhA | XNC1_0638 | XNC1_1407 | Fumarate reductase, anaerobic, catalytic and NAD/flavoprotein subunit. | Succinate dehydrogenase, catalytic and NAD/flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.911 |
| gidA | mnmC | XNC1_0034 | XNC1_3175 | Glucose-inhibited division protein, oxidoreductase-like with FAD/NAD(P)-binding domain; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Putative peptidase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.400 |
| glpD | frdA | XNC1_4469 | XNC1_0638 | Sn-glycerol-3-phosphate dehydrogenase FAD/NAD(P)-binding (aerobic); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Fumarate reductase, anaerobic, catalytic and NAD/flavoprotein subunit. | 0.574 |
| gltD | lpd | XNC1_4169 | XNC1_1082 | Glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein. | Dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes. | 0.816 |
| gor | fadH | XNC1_4315 | XNC1_4145 | Glutathione oxidoreductase, nucleotide-binding. | 2,4-dienoyl-CoA reductase, NADH and FMN-linked. | 0.439 |
| gor | trxB | XNC1_4315 | XNC1_1547 | Glutathione oxidoreductase, nucleotide-binding. | Thioredoxin reductase, FAD/NAD(P)-binding. | 0.480 |
| lpd | fadH | XNC1_1082 | XNC1_4145 | Dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes. | 2,4-dienoyl-CoA reductase, NADH and FMN-linked. | 0.439 |
| lpd | gltD | XNC1_1082 | XNC1_4169 | Dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes. | Glutamate synthase, small subunit, nucleotide-binding, 4Fe-4S protein. | 0.816 |
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