Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XNC1_0881 | XNC1_1260 | XNC1_0881 | XNC1_1260 | Protein mazG. | Conserved hypothetical protein; Belongs to the CinA family. | 0.900 |
| XNC1_0881 | cobB | XNC1_0881 | XNC1_2716 | Protein mazG. | Putative enzyme with DHS-like NAD/FAD-binding domain; Belongs to the sirtuin family. Class III subfamily. | 0.900 |
| XNC1_0881 | nadD | XNC1_0881 | XNC1_1335 | Protein mazG. | Nicotinic acid mononucleotide adenylyltransferase, NAD(P)-requiring; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.901 |
| XNC1_0881 | nadE | XNC1_0881 | XNC1_3289 | Protein mazG. | Putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.900 |
| XNC1_0881 | nadK | XNC1_0881 | XNC1_3250 | Protein mazG. | NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.901 |
| XNC1_0881 | nadR | XNC1_0881 | XNC1_0681 | Protein mazG. | Transcriptional regulator of NAD biosynthesis; regulator of PnuC activity; NMN adenylyltransferase. | 0.903 |
| XNC1_0881 | nudC | XNC1_0881 | XNC1_0615 | Protein mazG. | NADH pyrophosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.906 |
| XNC1_0881 | pncB | XNC1_0881 | XNC1_1588 | Protein mazG. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.917 |
| XNC1_0881 | pntA | XNC1_0881 | XNC1_2226 | Protein mazG. | Pyridine nucleotide transhydrogenase (proton pump), alpha subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family. | 0.900 |
| XNC1_0881 | pntB | XNC1_0881 | XNC1_2227 | Protein mazG. | Pyridine nucleotide transhydrogenase (proton pump), beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family. | 0.901 |
| XNC1_0881 | sthA | XNC1_0881 | XNC1_0273 | Protein mazG. | Soluble pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.906 |
| XNC1_0881 | surE | XNC1_0881 | XNC1_3849 | Protein mazG. | Survival protein, protein damage control; Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5'-monophosphates and ribonucleoside 3'-monophosphates with highest affinity to 3'-AMP. Also hydrolyzes polyphosphate (exopolyphosphatase activity) with the preference for short-chain-length substrates (P20-25). Might be involved in the regulation of dNTP and NTP pools, and in the turnover of 3'-mononucleotides produced by numerous intracellular RNases (T1, T2, and F) during the degradation of various RNAs. | 0.901 |
| XNC1_0881 | ushA | XNC1_0881 | XNC1_0942 | Protein mazG. | Bifunctional: UDP-sugar hydrolase; 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.900 |
| XNC1_1260 | XNC1_0881 | XNC1_1260 | XNC1_0881 | Conserved hypothetical protein; Belongs to the CinA family. | Protein mazG. | 0.900 |
| XNC1_1260 | nadD | XNC1_1260 | XNC1_1335 | Conserved hypothetical protein; Belongs to the CinA family. | Nicotinic acid mononucleotide adenylyltransferase, NAD(P)-requiring; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.958 |
| XNC1_1260 | nadE | XNC1_1260 | XNC1_3289 | Conserved hypothetical protein; Belongs to the CinA family. | Putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.527 |
| XNC1_1260 | nadR | XNC1_1260 | XNC1_0681 | Conserved hypothetical protein; Belongs to the CinA family. | Transcriptional regulator of NAD biosynthesis; regulator of PnuC activity; NMN adenylyltransferase. | 0.950 |
| XNC1_1260 | nudC | XNC1_1260 | XNC1_0615 | Conserved hypothetical protein; Belongs to the CinA family. | NADH pyrophosphatase; Belongs to the Nudix hydrolase family. NudC subfamily. | 0.900 |
| XNC1_1260 | pncB | XNC1_1260 | XNC1_1588 | Conserved hypothetical protein; Belongs to the CinA family. | Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family. | 0.924 |
| XNC1_1260 | surE | XNC1_1260 | XNC1_3849 | Conserved hypothetical protein; Belongs to the CinA family. | Survival protein, protein damage control; Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5'-monophosphates and ribonucleoside 3'-monophosphates with highest affinity to 3'-AMP. Also hydrolyzes polyphosphate (exopolyphosphatase activity) with the preference for short-chain-length substrates (P20-25). Might be involved in the regulation of dNTP and NTP pools, and in the turnover of 3'-mononucleotides produced by numerous intracellular RNases (T1, T2, and F) during the degradation of various RNAs. | 0.903 |
page 1 of 9