STRINGSTRING
rps13 rps13 T459_21746 T459_21746 T459_23835 T459_23835 T459_33194 T459_33194 T459_28861 T459_28861 T459_33254 T459_33254 T459_05050 T459_05050 T459_06326 T459_06326 T459_06248 T459_06248 T459_10914 T459_10914 T459_07692 T459_07692 T459_17187 T459_17187 T459_18399 T459_18399 T459_20528 T459_20528 T459_16833 T459_16833 T459_30835 T459_30835 T459_31511 T459_31511 T459_21135 T459_21135 T459_21416 T459_21416 T459_21669 T459_21669 T459_21932 T459_21932 T459_20845 T459_20845 T459_17986 T459_17986 T459_18398 T459_18398 T459_13587 T459_13587 T459_13120 T459_13120 T459_07376 T459_07376 Rps16 Rps16 T459_10579 T459_10579 T459_05652 T459_05652 T459_05647 T459_05647 T459_05958 T459_05958 T459_05984 T459_05984 T459_06095 T459_06095 T459_06691 T459_06691 T459_00013 T459_00013 T459_00716 T459_00716 Rpl22 Rpl22 Rps12 Rps12 rps14 rps14 rpl20 rpl20
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps13Ribosomal protein S13, mitochondrial; Belongs to the universal ribosomal protein uS13 family. (116 aa)
T459_2174650S ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family. (167 aa)
T459_2383550S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. (239 aa)
T459_3319450S ribosomal protein L5, chloroplastic. (271 aa)
T459_2886150S ribosomal protein L27. (150 aa)
T459_3325450S ribosomal protein L24, chloroplastic; Belongs to the universal ribosomal protein uL24 family. (194 aa)
T459_0505050S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (126 aa)
T459_0632660S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family. (102 aa)
T459_06248Uncharacterized protein. (148 aa)
T459_1091430S ribosomal protein S17, chloroplastic; Belongs to the universal ribosomal protein uS17 family. (159 aa)
T459_0769250S ribosomal protein L28. (142 aa)
T459_1718750S ribosomal protein L21, chloroplastic. (221 aa)
T459_1839950S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (207 aa)
T459_2052850S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. (235 aa)
T459_16833Ribosomal_TL5_C domain-containing protein. (101 aa)
T459_3083550S ribosomal protein L4. (197 aa)
T459_3151150S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family. (237 aa)
T459_2113550S ribosomal protein L19, chloroplastic. (241 aa)
T459_2141650S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (213 aa)
T459_21669Uncharacterized protein. (147 aa)
T459_2193250S ribosomal protein L17. (171 aa)
T459_20845Trigger factor-like protein TIG, Chloroplastic. (538 aa)
T459_17986Uncharacterized protein. (339 aa)
T459_1839850S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (153 aa)
T459_13587Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (266 aa)
T459_13120Ribosomal protein S14, mitochondrial. (108 aa)
T459_0737650S ribosomal protein L13. (195 aa)
Rps1630S ribosomal protein S16, chloroplastic. (87 aa)
T459_1057950S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (266 aa)
T459_05652Uncharacterized protein. (109 aa)
T459_0564750S ribosomal protein L21, mitochondrial. (263 aa)
T459_0595850S ribosomal protein L15. (476 aa)
T459_05984Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (322 aa)
T459_06095Ribosomal_L11 domain-containing protein. (112 aa)
T459_06691Ribosomal_TL5_C domain-containing protein. (236 aa)
T459_0001350S ribosomal protein L11, chloroplastic; Belongs to the universal ribosomal protein uL11 family. (222 aa)
T459_0071650S ribosomal protein L19-1, chloroplastic. (271 aa)
Rpl2250S ribosomal protein L22, chloroplastic; Belongs to the universal ribosomal protein uL22 family. (155 aa)
Rps12Ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family. (125 aa)
rps1430S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles. (100 aa)
rpl2050S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (154 aa)
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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