(11 nodes) Telomerase RNA binding network (Capsicum annuum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

Your Input:
	T459_34753	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (990 aa)
	T459_08921	Uncharacterized protein. (142 aa)
	T459_08985	Uncharacterized protein. (147 aa)
	T459_09216	EST1_DNA_bind domain-containing protein. (182 aa)
	T459_04341	Uncharacterized protein. (92 aa)
	T459_35110	Uncharacterized protein. (142 aa)
	T459_07621	H/ACA ribonucleoprotein complex subunit 3. (64 aa)
	T459_05554	Uncharacterized protein. (986 aa)
	T459_26434	Protein SMG7. (969 aa)
	T459_34755	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (205 aa)
	T459_11898	Uncharacterized protein. (140 aa)

Your Current Organism:

Capsicum annuum

NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T459_04341	T459_05554	A0A2G3A4T4	A0A1U8FTW1	Uncharacterized protein.	Uncharacterized protein.	0.569
T459_04341	T459_07621	A0A2G3A4T4	A0A1U8G5Q7	Uncharacterized protein.	H/ACA ribonucleoprotein complex subunit 3.	0.547
T459_04341	T459_08985	A0A2G3A4T4	A0A2G2ZY33	Uncharacterized protein.	Uncharacterized protein.	0.569
T459_04341	T459_09216	A0A2G3A4T4	A0A2G2ZYQ3	Uncharacterized protein.	EST1_DNA_bind domain-containing protein.	0.569
T459_04341	T459_26434	A0A2G3A4T4	A0A1U8E8Y3	Uncharacterized protein.	Protein SMG7.	0.569
T459_04341	T459_34753	A0A2G3A4T4	A0A2G2XV87	Uncharacterized protein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.903
T459_04341	T459_34755	A0A2G3A4T4	A0A2G2XV75	Uncharacterized protein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.895
T459_05554	T459_04341	A0A1U8FTW1	A0A2G3A4T4	Uncharacterized protein.	Uncharacterized protein.	0.569
T459_05554	T459_07621	A0A1U8FTW1	A0A1U8G5Q7	Uncharacterized protein.	H/ACA ribonucleoprotein complex subunit 3.	0.569
T459_05554	T459_08985	A0A1U8FTW1	A0A2G2ZY33	Uncharacterized protein.	Uncharacterized protein.	0.543
T459_05554	T459_09216	A0A1U8FTW1	A0A2G2ZYQ3	Uncharacterized protein.	EST1_DNA_bind domain-containing protein.	0.543
T459_05554	T459_26434	A0A1U8FTW1	A0A1U8E8Y3	Uncharacterized protein.	Protein SMG7.	0.543
T459_05554	T459_34753	A0A1U8FTW1	A0A2G2XV87	Uncharacterized protein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.844
T459_05554	T459_34755	A0A1U8FTW1	A0A2G2XV75	Uncharacterized protein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.844
T459_07621	T459_04341	A0A1U8G5Q7	A0A2G3A4T4	H/ACA ribonucleoprotein complex subunit 3.	Uncharacterized protein.	0.547
T459_07621	T459_05554	A0A1U8G5Q7	A0A1U8FTW1	H/ACA ribonucleoprotein complex subunit 3.	Uncharacterized protein.	0.569
T459_07621	T459_08985	A0A1U8G5Q7	A0A2G2ZY33	H/ACA ribonucleoprotein complex subunit 3.	Uncharacterized protein.	0.569
T459_07621	T459_09216	A0A1U8G5Q7	A0A2G2ZYQ3	H/ACA ribonucleoprotein complex subunit 3.	EST1_DNA_bind domain-containing protein.	0.569
T459_07621	T459_26434	A0A1U8G5Q7	A0A1U8E8Y3	H/ACA ribonucleoprotein complex subunit 3.	Protein SMG7.	0.569
T459_07621	T459_34753	A0A1U8G5Q7	A0A2G2XV87	H/ACA ribonucleoprotein complex subunit 3.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.903