15 items (Capsicum annuum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	orf293a	Ribosomal_L2 domain-containing protein. (293 aa)
	T459_13767	L51_S25_CI-B8 domain-containing protein. (119 aa)
	T459_34084	Uncharacterized protein. (67 aa)
	T459_29368	Uncharacterized protein. (277 aa)
	T459_30096	Ribosomal_L2 domain-containing protein. (316 aa)
	T459_25451	60S ribosomal protein L2, mitochondrial. (155 aa)
	T459_25921	60S ribosomal protein L2, mitochondrial. (388 aa)
	T459_21669	Uncharacterized protein. (147 aa)
	T459_21880	Uncharacterized protein. (240 aa)
	T459_21932	50S ribosomal protein L17. (171 aa)
	T459_22103	60S ribosomal protein L2, mitochondrial. (303 aa)
	T459_19017	Prolamin_like domain-containing protein. (263 aa)
	T459_13676	Uncharacterized protein. (133 aa)
	T459_07376	50S ribosomal protein L13. (195 aa)
	T459_08241	Uncharacterized protein. (172 aa)

Your Current Organism:

Capsicum annuum

NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T459_07376	T459_08241	A0A2G2ZTF7	A0A2G2ZVY9	50S ribosomal protein L13.	Uncharacterized protein.	0.905
T459_07376	T459_13676	A0A2G2ZTF7	A0A2G2ZFG5	50S ribosomal protein L13.	Uncharacterized protein.	0.780
T459_07376	T459_13767	A0A2G2ZTF7	A0A1U8F553	50S ribosomal protein L13.	L51_S25_CI-B8 domain-containing protein.	0.953
T459_07376	T459_19017	A0A2G2ZTF7	A0A2G2Z0U8	50S ribosomal protein L13.	Prolamin_like domain-containing protein.	0.905
T459_07376	T459_21669	A0A2G2ZTF7	A0A2G2YXB1	50S ribosomal protein L13.	Uncharacterized protein.	0.964
T459_07376	T459_21880	A0A2G2ZTF7	A0A2G2YY08	50S ribosomal protein L13.	Uncharacterized protein.	0.907
T459_07376	T459_21932	A0A2G2ZTF7	A0A2G2YYG1	50S ribosomal protein L13.	50S ribosomal protein L17.	0.981
T459_07376	T459_22103	A0A2G2ZTF7	A0A2G2YYL5	50S ribosomal protein L13.	60S ribosomal protein L2, mitochondrial.	0.780
T459_07376	T459_25451	A0A2G2ZTF7	A0A2G2YKS3	50S ribosomal protein L13.	60S ribosomal protein L2, mitochondrial.	0.780
T459_07376	T459_25921	A0A2G2ZTF7	A0A2G2YM45	50S ribosomal protein L13.	60S ribosomal protein L2, mitochondrial.	0.780
T459_07376	T459_29368	A0A2G2ZTF7	A0A2G2Y595	50S ribosomal protein L13.	Uncharacterized protein.	0.903
T459_07376	T459_30096	A0A2G2ZTF7	A0A2G2Y7Y2	50S ribosomal protein L13.	Ribosomal_L2 domain-containing protein.	0.780
T459_07376	T459_34084	A0A2G2ZTF7	A0A2G2XX41	50S ribosomal protein L13.	Uncharacterized protein.	0.780
T459_07376	orf293a	A0A2G2ZTF7	A0A075VWW8	50S ribosomal protein L13.	Ribosomal_L2 domain-containing protein.	0.780
T459_08241	T459_07376	A0A2G2ZVY9	A0A2G2ZTF7	Uncharacterized protein.	50S ribosomal protein L13.	0.905
T459_08241	T459_13676	A0A2G2ZVY9	A0A2G2ZFG5	Uncharacterized protein.	Uncharacterized protein.	0.670
T459_08241	T459_13767	A0A2G2ZVY9	A0A1U8F553	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.967
T459_08241	T459_21669	A0A2G2ZVY9	A0A2G2YXB1	Uncharacterized protein.	Uncharacterized protein.	0.939
T459_08241	T459_21880	A0A2G2ZVY9	A0A2G2YY08	Uncharacterized protein.	Uncharacterized protein.	0.860
T459_08241	T459_21932	A0A2G2ZVY9	A0A2G2YYG1	Uncharacterized protein.	50S ribosomal protein L17.	0.920