STRINGSTRING
T459_29283 T459_29283 T459_35430 T459_35430 CTS CTS T459_06843 T459_06843 T459_15618 T459_15618 T459_20391 T459_20391 ICDH ICDH T459_23883 T459_23883 T459_22640 T459_22640 T459_22642 T459_22642 T459_22641 T459_22641 T459_30765 T459_30765 T459_25758 T459_25758
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T459_29283Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (473 aa)
T459_35430Phenylalanine ammonia-lyase. (694 aa)
CTSCitrate synthase; Belongs to the citrate synthase family. (470 aa)
T459_06843Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (484 aa)
T459_15618Phenylalanine ammonia-lyase. (716 aa)
T459_20391Citrate synthase. (438 aa)
ICDHIsocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (415 aa)
T459_23883Citrate synthase. (335 aa)
T459_22640Phenylalanine ammonia-lyase. (557 aa)
T459_22642Phenylalanine ammonia-lyase. (720 aa)
T459_22641Phenylalanine ammonia-lyase. (721 aa)
T459_30765Phenylalanine ammonia-lyase; Belongs to the PAL/histidase family. (660 aa)
T459_25758Phenylalanine ammonia-lyase. (712 aa)
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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