STRINGSTRING
Actin Actin T459_15449 T459_15449 T459_21027 T459_21027 T459_28199 T459_28199 T459_25669 T459_25669 T459_06514 T459_06514 CTS CTS T459_12396 T459_12396 T459_20391 T459_20391 T459_19349 T459_19349 T459_23883 T459_23883 T459_26461 T459_26461 T459_17979 T459_17979 T459_18256 T459_18256
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ActinActin. (377 aa)
T459_15449Actin. (377 aa)
T459_21027PKS_ER domain-containing protein. (437 aa)
T459_28199Actin. (377 aa)
T459_25669Actin. (377 aa)
T459_06514GDP-L-galactose phosphorylase 1. (440 aa)
CTSCitrate synthase; Belongs to the citrate synthase family. (470 aa)
T459_12396Actin. (88 aa)
T459_20391Citrate synthase. (438 aa)
T459_19349Actin. (124 aa)
T459_23883Citrate synthase. (335 aa)
T459_26461Actin. (387 aa)
T459_17979GDP-L-galactose phosphorylase 1. (436 aa)
T459_18256Actin. (377 aa)
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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