84 items (Capsicum annuum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T459_23664	V-type proton ATPase subunit E. (229 aa)
	T459_03025	V-type proton ATPase subunit D. (261 aa)
	T459_32146	Rac-like GTP-binding protein RAC1. (198 aa)
	T459_24202	Rac-like GTP-binding protein ARAC7. (211 aa)
	T459_24740	Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family. (475 aa)
	T459_25303	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	T459_26416	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	T459_31462	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (449 aa)
	T459_31814	Ras-related protein Rab7. (206 aa)
	T459_30800	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	T459_33590	25.3 kDa vesicle transport protein; Belongs to the synaptobrevin family. (218 aa)
	T459_30251	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (111 aa)
	T459_01144	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	T459_29456	Ras-related protein Rab-5C. (201 aa)
	T459_25911	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
	T459_16406	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
	T459_03748	Syntaxin-21; Belongs to the syntaxin family. (273 aa)
	T459_01416	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (164 aa)
	T459_10723	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (443 aa)
	T459_03907	V-type proton ATPase subunit E. (241 aa)
	T459_17256	V-type proton ATPase catalytic subunit A. (623 aa)
	T459_03191	Rac-like GTP-binding protein 7. (210 aa)
	T459_26353	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family. (351 aa)
	T459_04235	Rac-like GTP-binding protein ARAC1. (197 aa)
	T459_05393	Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family. (475 aa)
	T459_05206	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (377 aa)
	T459_04894	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (130 aa)
	T459_06198	Rac-like GTP-binding protein RHO1. (197 aa)
	T459_06548	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	T459_06979	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	T459_09337	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	T459_05084	Rac-like GTP-binding protein 7. (197 aa)
	T459_10259	Rac-like GTP-binding protein 4. (210 aa)
	T459_09894	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (376 aa)
	T459_32274	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (110 aa)
	T459_08181	25.3 kDa vesicle transport protein; Belongs to the synaptobrevin family. (218 aa)
	T459_19907	V-type proton ATPase subunit e1. (70 aa)
	T459_10019	Protein transport protein Sec61 subunit gamma. (69 aa)
	T459_13340	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (166 aa)
	T459_12874	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	T459_00209	V-type proton ATPase subunit E. (229 aa)
	T459_07258	V-type proton ATPase subunit e1. (70 aa)
	T459_12302	V-type proton ATPase subunit D. (261 aa)
	T459_11915	Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D. (1627 aa)
	T459_35079	Syntaxin-81. (393 aa)
	T459_11567	Rac-like GTP-binding protein RHO1. (197 aa)
	T459_14809	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (81 aa)
	T459_14802	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (84 aa)
	T459_15604	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (111 aa)
	T459_34843	Phosphatidylinositol 3-kinase, root isoform; Belongs to the PI3/PI4-kinase family. (815 aa)
	T459_16220	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
	T459_17205	Syntaxin-81. (317 aa)
	T459_17839	Protein transport protein Sec61 subunit gamma. (69 aa)
	T459_33174	Calnexin-like protein. (537 aa)
	T459_17489	V-type proton ATPase 21 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family. (177 aa)
	T459_17934	Syntaxin-21; Belongs to the syntaxin family. (283 aa)
	T459_18143	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (818 aa)
	T459_18299	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
	T459_34864	Calreticulin. (285 aa)
	T459_34591	Calreticulin. (434 aa)
	T459_32168	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (488 aa)
	T459_30072	Ras-related protein Rab7. (184 aa)
	T459_30653	1-phosphatidylinositol-3-phosphate 5-kinase FAB1B. (1793 aa)
	T459_30995	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (384 aa)
	T459_26718	Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C. (790 aa)
	T459_28301	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (819 aa)
	T459_25495	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (499 aa)
	T459_21648	V-type proton ATPase 21 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family. (182 aa)
	T459_18740	Preprotein translocase subunit SECY, chloroplastic. (546 aa)
	T459_18779	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. (454 aa)
	T459_19201	1-phosphatidylinositol-3-phosphate 5-kinase FAB1A. (1789 aa)
	T459_16170	Uncharacterized protein. (610 aa)
	T459_16747	Protein transport protein Sec61 subunit beta. (78 aa)
	T459_17062	Syntaxin-22; Belongs to the syntaxin family. (218 aa)
	T459_17151	PIPK domain-containing protein. (1643 aa)
	T459_14420	Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C. (1734 aa)
	T459_12524	Ras-related protein Rab7. (184 aa)
	T459_10651	Calnexin-like protein. (541 aa)
	T459_11003	1-phosphatidylinositol-3-phosphate 5-kinase FAB1A. (911 aa)
	T459_04335	Ras-related protein Rab5. (176 aa)
	T459_06063	Ras-related protein Rab-5C. (182 aa)
	T459_00918	Syntaxin-21; Belongs to the syntaxin family. (273 aa)
	T459_01391	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (820 aa)
	T459_13399	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)

Your Current Organism:

Capsicum annuum

NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T459_00209	T459_01391	A0A1U8GDW0	A0A2G3AGZ7	V-type proton ATPase subunit E.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.951
T459_00209	T459_01416	A0A1U8GDW0	A0A1U8F6P7	V-type proton ATPase subunit E.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.854
T459_00209	T459_03025	A0A1U8GDW0	A0A1U8E721	V-type proton ATPase subunit E.	V-type proton ATPase subunit D.	0.951
T459_00209	T459_03907	A0A1U8GDW0	A0A1U8F810	V-type proton ATPase subunit E.	V-type proton ATPase subunit E.	0.900
T459_00209	T459_04894	A0A1U8GDW0	A0A1U8FKD8	V-type proton ATPase subunit E.	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.990
T459_00209	T459_05206	A0A1U8GDW0	A0A1U8FK77	V-type proton ATPase subunit E.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.956
T459_00209	T459_07258	A0A1U8GDW0	A0A1U8GDX0	V-type proton ATPase subunit E.	V-type proton ATPase subunit e1.	0.900
T459_00209	T459_09894	A0A1U8GDW0	A0A1U8FYZ7	V-type proton ATPase subunit E.	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.956
T459_00209	T459_12302	A0A1U8GDW0	A0A1U8GEJ0	V-type proton ATPase subunit E.	V-type proton ATPase subunit D.	0.951
T459_00209	T459_13340	A0A1U8GDW0	A0A1U8GBD5	V-type proton ATPase subunit E.	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.854
T459_00209	T459_15604	A0A1U8GDW0	A0A1U8GRL1	V-type proton ATPase subunit E.	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.892
T459_00209	T459_17256	A0A1U8GDW0	A0A1U8FAN4	V-type proton ATPase subunit E.	V-type proton ATPase catalytic subunit A.	0.958
T459_00209	T459_17489	A0A1U8GDW0	A0A1U8H580	V-type proton ATPase subunit E.	V-type proton ATPase 21 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	0.955
T459_00209	T459_18143	A0A1U8GDW0	A0A1U8H960	V-type proton ATPase subunit E.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.951
T459_00209	T459_18779	A0A1U8GDW0	A0A2G2YZQ7	V-type proton ATPase subunit E.	V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.	0.985
T459_00209	T459_19907	A0A1U8GDW0	A0A1U8G2Q5	V-type proton ATPase subunit E.	V-type proton ATPase subunit e1.	0.900
T459_00209	T459_21648	A0A1U8GDW0	A0A2G2YXM0	V-type proton ATPase subunit E.	V-type proton ATPase 21 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.	0.955
T459_00209	T459_23664	A0A1U8GDW0	A0A1U8E225	V-type proton ATPase subunit E.	V-type proton ATPase subunit E.	0.901
T459_00209	T459_25495	A0A1U8GDW0	A0A2G2YLB7	V-type proton ATPase subunit E.	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.	0.980
T459_00209	T459_26353	A0A1U8GDW0	A0A1U8FH10	V-type proton ATPase subunit E.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.990