STRINGSTRING
pyrF pyrF pyrC pyrC THII_0118 THII_0118 THII_0619 THII_0619 THII_0646 THII_0646 pyrB pyrB THII_0648 THII_0648 carB carB carA carA THII_0778 THII_0778 THII_1303 THII_1303 pyrE pyrE THII_3058 THII_3058 pyrD pyrD THII_3728 THII_3728
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pyrFOrotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (238 aa)
pyrCDihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. (346 aa)
THII_0118Glutamate synthase, domain 2. (145 aa)
THII_0619Protein involved in sulfur oxidation DsrL. (662 aa)
THII_0646Dihydroorotase. (426 aa)
pyrBAspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (323 aa)
THII_0648Uracil phosphoribosyltransferase. (167 aa)
carBCarbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. (1081 aa)
carACarbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. (374 aa)
THII_0778Pyridine nucleotide-disulfide oxidoreductase family. (1181 aa)
THII_1303CDP-6-deoxy-delta-3,4-glucoseen reductase. (494 aa)
pyrEOrotate phosphoribosyl transferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (214 aa)
THII_3058Glutamate synthase. (481 aa)
pyrDDihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (349 aa)
THII_3728Glutamate synthase. (1545 aa)
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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