63 items (Solanum lycopersicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3Q7EHZ8	Uncharacterized protein. (330 aa)
	ARG2	Uncharacterized protein; Belongs to the arginase family. (664 aa)
	A0A3Q7ESW9	Semialdhyde_dh domain-containing protein. (397 aa)
	A0A3Q7EV39	Aminoacylase. (448 aa)
	A0A3Q7F7L6	Uncharacterized protein. (972 aa)
	PDH	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (496 aa)
	A0A3Q7FAY8	N-acetyltransferase domain-containing protein. (594 aa)
	A0A3Q7FBC4	S-adenosylmethionine decarboxylase proenzyme. (362 aa)
	A0A3Q7FBC8	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate. (494 aa)
	A0A3Q7FFD9	Amino_oxidase domain-containing protein. (478 aa)
	A0A3Q7FJ90	N-acetyltransferase domain-containing protein. (609 aa)
	A0A3Q7FME1	Uncharacterized protein. (276 aa)
	A0A3Q7FQW8	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (397 aa)
	Amadh2	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (505 aa)
	A0A3Q7G1W5	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family. (309 aa)
	A0A3Q7G3N9	S-AdoMet_synt_M domain-containing protein. (92 aa)
	A0A3Q7GAT5	CP-type G domain-containing protein. (560 aa)
	A0A3Q7GD98	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (388 aa)
	A0A3Q7GM08	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (524 aa)
	A0A3Q7GMP4	CN hydrolase domain-containing protein. (310 aa)
	A0A3Q7GTM3	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. (717 aa)
	A0A3Q7GUK9	Uncharacterized protein. (326 aa)
	AS	Uncharacterized protein. (525 aa)
	SlADH12A1	Aldedh domain-containing protein. (555 aa)
	A0A3Q7H8R6	Uncharacterized protein. (1049 aa)
	A0A3Q7H8T8	PABS domain-containing protein. (319 aa)
	A0A3Q7H9Y9	Amino_oxidase domain-containing protein. (490 aa)
	A0A3Q7HJ40	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (489 aa)
	A0A3Q7HLD6	Aminotran_1_2 domain-containing protein. (461 aa)
	OAT	Ornithine aminotransferase. (469 aa)
	A0A3Q7HNG4	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family. (720 aa)
	A0A3Q7HPA9	Uncharacterized protein. (396 aa)
	A0A3Q7HR78	Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (737 aa)
	NAOD	M20_dimer domain-containing protein. (459 aa)
	A0A3Q7HS08	M20_dimer domain-containing protein. (434 aa)
	NAOAT	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa)
	A0A3Q7HTY1	M20_dimer domain-containing protein. (438 aa)
	A0A3Q7HVL1	Uncharacterized protein. (376 aa)
	A0A3Q7HXI0	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate. (472 aa)
	A0A3Q7I097	Uncharacterized protein. (853 aa)
	A0A3Q7I119	Uncharacterized protein. (791 aa)
	A0A3Q7IH94	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (671 aa)
	A0A3Q7ISJ5	Uncharacterized protein. (447 aa)
	A0A3Q7J1W4	PABS domain-containing protein. (331 aa)
	A0A3Q7J1Y7	Fe2OG dioxygenase domain-containing protein. (790 aa)
	A0A3Q7JD34	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (379 aa)
	A0A3Q7JVH2	Uncharacterized protein. (421 aa)
	A0A3Q7JWU9	Uncharacterized protein. (365 aa)
	ADC	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (721 aa)
	K4AU12_SOLLC	Aldedh domain-containing protein. (207 aa)
	OTC	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (374 aa)
	ASS	Argininosuccinate synthase. (494 aa)
	NAGK	N-acetylglutamate kinase. (347 aa)
	ODC	Ornithine decarboxylase; Catalyzes the first and rate-limiting step of polyamine biosynthesis that converts ornithine into putrescine, which is the precursor for the polyamines, spermidine and spermine. Polyamines are essential for cell proliferation and are implicated in cellular processes, ranging from DNA replication to apoptosis. Belongs to the Orn/Lys/Arg decarboxylase class-II family. (431 aa)
	SPE1_SOLLC	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (502 aa)
	GSA_SOLLC	Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. (481 aa)
	SlADH10A9	Putative betaine aldehyde dehyrogenase; Belongs to the aldehyde dehydrogenase family. (504 aa)
	spe4	Putative spermine synthase. (349 aa)
	SPM1	Putative spermine synthase; Belongs to the spermidine/spermine synthase family. (356 aa)
	GABA-TP1	Gamma aminobutyrate transaminase 1, mitochondrial; Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate or glyoxylate as amino-group acceptor. Cannot use beta-alanine, ornithine, acetylornithine, serine, glycine, asparagine, glutamine, glutamate, valine, leucine, isoleucine, methionine, phenylalanine, histidine, lysine, arginine, aspartate, threonine, tyrosine, tryptophan, proline, or cysteine as amino donors. Acts predominantly in vegetative tissues; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (515 aa)
	PRO2	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. (717 aa)
	CPA	N-carbamoylputrescine amidase; Involved in polyamine biosynthesis. Belongs to the carbon-nitrogen hydrolase superfamily. (300 aa)
	SPDSYN	Spermidine synthase; Belongs to the spermidine/spermine synthase family. (342 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7EHZ8	A0A3Q7ESW9	A0A3Q7EHZ8	A0A3Q7ESW9	Uncharacterized protein.	Semialdhyde_dh domain-containing protein.	0.408
A0A3Q7EHZ8	A0A3Q7F7L6	A0A3Q7EHZ8	A0A3Q7F7L6	Uncharacterized protein.	Uncharacterized protein.	0.641
A0A3Q7EHZ8	A0A3Q7FFD9	A0A3Q7EHZ8	A0A3Q7FFD9	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.641
A0A3Q7EHZ8	A0A3Q7FQW8	A0A3Q7EHZ8	A0A3Q7FQW8	Uncharacterized protein.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.890
A0A3Q7EHZ8	A0A3Q7G1W5	A0A3Q7EHZ8	A0A3Q7G1W5	Uncharacterized protein.	PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.	0.983
A0A3Q7EHZ8	A0A3Q7GD98	A0A3Q7EHZ8	A0A3Q7GD98	Uncharacterized protein.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.891
A0A3Q7EHZ8	A0A3Q7H8T8	A0A3Q7EHZ8	A0A3Q7H8T8	Uncharacterized protein.	PABS domain-containing protein.	0.726
A0A3Q7EHZ8	A0A3Q7H9Y9	A0A3Q7EHZ8	A0A3Q7H9Y9	Uncharacterized protein.	Amino_oxidase domain-containing protein.	0.582
A0A3Q7EHZ8	A0A3Q7HPA9	A0A3Q7EHZ8	A0A3Q7HPA9	Uncharacterized protein.	Uncharacterized protein.	0.477
A0A3Q7EHZ8	A0A3Q7IH94	A0A3Q7EHZ8	A0A3Q7IH94	Uncharacterized protein.	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	0.802
A0A3Q7EHZ8	A0A3Q7J1W4	A0A3Q7EHZ8	A0A3Q7J1W4	Uncharacterized protein.	PABS domain-containing protein.	0.726
A0A3Q7EHZ8	A0A3Q7J1Y7	A0A3Q7EHZ8	A0A3Q7J1Y7	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.582
A0A3Q7EHZ8	A0A3Q7JVH2	A0A3Q7EHZ8	A0A3Q7JVH2	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A3Q7EHZ8	ADC	A0A3Q7EHZ8	G8Z275	Uncharacterized protein.	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	0.804
A0A3Q7EHZ8	ARG2	A0A3Q7EHZ8	A0A3Q7EK65	Uncharacterized protein.	Uncharacterized protein; Belongs to the arginase family.	0.577
A0A3Q7EHZ8	AS	A0A3Q7EHZ8	A0A3Q7H0R9	Uncharacterized protein.	Uncharacterized protein.	0.498
A0A3Q7EHZ8	ASS	A0A3Q7EHZ8	K4BXV0	Uncharacterized protein.	Argininosuccinate synthase.	0.554
A0A3Q7EHZ8	ODC	A0A3Q7EHZ8	O22616	Uncharacterized protein.	Ornithine decarboxylase; Catalyzes the first and rate-limiting step of polyamine biosynthesis that converts ornithine into putrescine, which is the precursor for the polyamines, spermidine and spermine. Polyamines are essential for cell proliferation and are implicated in cellular processes, ranging from DNA replication to apoptosis. Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.836
A0A3Q7EHZ8	SPDSYN	A0A3Q7EHZ8	Q9ZS45	Uncharacterized protein.	Spermidine synthase; Belongs to the spermidine/spermine synthase family.	0.983
A0A3Q7EHZ8	SPE1_SOLLC	A0A3Q7EHZ8	P49726	Uncharacterized protein.	Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.	0.802

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