STRINGSTRING
CYP97C11 CYP97C11 CYP97A29 CYP97A29 CrtR-b2 CrtR-b2 LCY1 LCY1 CrtR-b1 CrtR-b1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CYP97C11Uncharacterized protein; Belongs to the cytochrome P450 family. (546 aa)
CYP97A29Cytochrome P450-type monooxygenase 97A29; Belongs to the cytochrome P450 family. (605 aa)
CrtR-b2Carotene beta-hydroxylase; Belongs to the sterol desaturase family. (314 aa)
LCY1Lycopene beta cyclase, chloroplastic; Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene. (500 aa)
CrtR-b1Beta-carotene hydroxylase; Belongs to the sterol desaturase family. (309 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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