42 items (Solanum lycopersicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3Q7EHU4	Uncharacterized protein. (830 aa)
	A0A3Q7EXV2	Uncharacterized protein. (567 aa)
	A0A3Q7EZ93	Uncharacterized protein. (201 aa)
	A0A3Q7F2S6	Uncharacterized protein. (373 aa)
	A0A3Q7F5W2	Uncharacterized protein. (183 aa)
	A0A3Q7F9M9	Uncharacterized protein. (222 aa)
	MED4	Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (378 aa)
	A0A3Q7FIY6	Uncharacterized protein. (128 aa)
	A0A3Q7FS44	Uncharacterized protein. (553 aa)
	A0A3Q7FYF1	Uncharacterized protein. (848 aa)
	A0A3Q7G439	Uncharacterized protein. (262 aa)
	A0A3Q7G567	Uncharacterized protein. (281 aa)
	A0A3Q7G5G2	TPR_REGION domain-containing protein. (220 aa)
	A0A3Q7GAJ5	Uncharacterized protein. (1395 aa)
	A0A3Q7GJ38	Uncharacterized protein. (138 aa)
	A0A3Q7GJ41	Uncharacterized protein. (108 aa)
	A0A3Q7GUY1	Uncharacterized protein. (421 aa)
	A0A3Q7H158	Iwr1 domain-containing protein. (372 aa)
	A0A3Q7H3F0	Uncharacterized protein. (570 aa)
	A0A3Q7H8Z3	Uncharacterized protein. (169 aa)
	A0A3Q7HAC2	Uncharacterized protein. (76 aa)
	A0A3Q7HBJ0	Uncharacterized protein. (95 aa)
	A0A3Q7HHK9	Uncharacterized protein. (121 aa)
	A0A3Q7HZL1	LETM1 domain-containing protein. (881 aa)
	A0A3Q7IAZ0	Uncharacterized protein. (561 aa)
	A0A3Q7IIB7	Urb2 domain-containing protein. (2055 aa)
	A0A3Q7IK76	Methyltransferase. (611 aa)
	A0A3Q7INB0	Uncharacterized protein. (55 aa)
	A0A3Q7IRB5	TPR_REGION domain-containing protein. (212 aa)
	A0A3Q7IZ73	Uncharacterized protein. (36 aa)
	A0A3Q7IZ80	LEA_2 domain-containing protein. (208 aa)
	A0A3Q7IZA2	Uncharacterized protein. (188 aa)
	A0A3Q7IZL3	Uncharacterized protein. (463 aa)
	A0A3Q7J4I5	Uncharacterized protein. (628 aa)
	A0A3Q7J797	Uncharacterized protein. (825 aa)
	A0A3Q7JBV9	Uncharacterized protein. (146 aa)
	A0A3Q7JHH9	Uncharacterized protein. (164 aa)
	A0A3Q7JPH0	LEA_2 domain-containing protein. (256 aa)
	K4AW67_SOLLC	Ubiquitin-like domain-containing protein. (131 aa)
	K4C6I9_SOLLC	Uncharacterized protein. (81 aa)
	K4D0T8_SOLLC	Uncharacterized protein. (162 aa)
	K4D7U6_SOLLC	Uncharacterized protein. (142 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7EHU4	A0A3Q7F5W2	A0A3Q7EHU4	A0A3Q7F5W2	Uncharacterized protein.	Uncharacterized protein.	0.509
A0A3Q7EHU4	A0A3Q7FS44	A0A3Q7EHU4	A0A3Q7FS44	Uncharacterized protein.	Uncharacterized protein.	0.492
A0A3Q7EHU4	A0A3Q7IRB5	A0A3Q7EHU4	A0A3Q7IRB5	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.431
A0A3Q7EHU4	A0A3Q7IZ73	A0A3Q7EHU4	A0A3Q7IZ73	Uncharacterized protein.	Uncharacterized protein.	0.449
A0A3Q7EHU4	A0A3Q7IZL3	A0A3Q7EHU4	A0A3Q7IZL3	Uncharacterized protein.	Uncharacterized protein.	0.400
A0A3Q7EHU4	K4D0T8_SOLLC	A0A3Q7EHU4	K4D0T8	Uncharacterized protein.	Uncharacterized protein.	0.536
A0A3Q7EHU4	K4D7U6_SOLLC	A0A3Q7EHU4	K4D7U6	Uncharacterized protein.	Uncharacterized protein.	0.460
A0A3Q7EXV2	A0A3Q7GJ38	A0A3Q7EXV2	A0A3Q7GJ38	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A3Q7EXV2	A0A3Q7GJ41	A0A3Q7EXV2	A0A3Q7GJ41	Uncharacterized protein.	Uncharacterized protein.	0.406
A0A3Q7EXV2	A0A3Q7H158	A0A3Q7EXV2	A0A3Q7H158	Uncharacterized protein.	Iwr1 domain-containing protein.	0.428
A0A3Q7EXV2	A0A3Q7H8Z3	A0A3Q7EXV2	A0A3Q7H8Z3	Uncharacterized protein.	Uncharacterized protein.	0.504
A0A3Q7EXV2	A0A3Q7HAC2	A0A3Q7EXV2	A0A3Q7HAC2	Uncharacterized protein.	Uncharacterized protein.	0.507
A0A3Q7EXV2	A0A3Q7HBJ0	A0A3Q7EXV2	A0A3Q7HBJ0	Uncharacterized protein.	Uncharacterized protein.	0.481
A0A3Q7EXV2	A0A3Q7HHK9	A0A3Q7EXV2	A0A3Q7HHK9	Uncharacterized protein.	Uncharacterized protein.	0.403
A0A3Q7EXV2	A0A3Q7IRB5	A0A3Q7EXV2	A0A3Q7IRB5	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.416
A0A3Q7EXV2	A0A3Q7IZ73	A0A3Q7EXV2	A0A3Q7IZ73	Uncharacterized protein.	Uncharacterized protein.	0.427
A0A3Q7EXV2	A0A3Q7IZA2	A0A3Q7EXV2	A0A3Q7IZA2	Uncharacterized protein.	Uncharacterized protein.	0.427
A0A3Q7EXV2	A0A3Q7IZL3	A0A3Q7EXV2	A0A3Q7IZL3	Uncharacterized protein.	Uncharacterized protein.	0.442
A0A3Q7EXV2	A0A3Q7J4I5	A0A3Q7EXV2	A0A3Q7J4I5	Uncharacterized protein.	Uncharacterized protein.	0.426
A0A3Q7EXV2	A0A3Q7JBV9	A0A3Q7EXV2	A0A3Q7JBV9	Uncharacterized protein.	Uncharacterized protein.	0.519

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