18 items (Solanum lycopersicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3Q7ECU5	Uncharacterized protein. (66 aa)
	A0A3Q7EW13	Uncharacterized protein. (91 aa)
	A0A3Q7EWI5	Uncharacterized protein. (87 aa)
	A0A3Q7F4D1	DUF641 domain-containing protein. (421 aa)
	A0A3Q7FS87	GUB_WAK_bind domain-containing protein. (309 aa)
	A0A3Q7FYN2	Uncharacterized protein. (53 aa)
	A0A3Q7FYS5	Uncharacterized protein. (344 aa)
	A0A3Q7GG26	Uncharacterized protein. (281 aa)
	A0A3Q7GG69	Uncharacterized protein. (81 aa)
	A0A3Q7H2M5	LEA_2 domain-containing protein. (208 aa)
	A0A3Q7HGF1	Uncharacterized protein. (200 aa)
	A0A3Q7HM12	Uncharacterized protein. (260 aa)
	A0A3Q7I5G9	NAB domain-containing protein. (284 aa)
	A0A3Q7IJ94	Uncharacterized protein. (499 aa)
	A0A3Q7IXS8	Pectinesterase domain-containing protein. (75 aa)
	A0A3Q7J0E9	LEA_2 domain-containing protein. (209 aa)
	A0A3Q7JHF6	Uncharacterized protein. (158 aa)
	A0A3Q7JHU2	Uncharacterized protein. (362 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3Q7ECU5	A0A3Q7EW13	Uncharacterized protein.	Uncharacterized protein.	0.489
A0A3Q7ECU5	A0A3Q7EWI5	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A3Q7ECU5	A0A3Q7FYN2	Uncharacterized protein.	Uncharacterized protein.	0.440
A0A3Q7ECU5	A0A3Q7GG69	Uncharacterized protein.	Uncharacterized protein.	0.500
A0A3Q7ECU5	A0A3Q7HGF1	Uncharacterized protein.	Uncharacterized protein.	0.403
A0A3Q7EW13	A0A3Q7ECU5	Uncharacterized protein.	Uncharacterized protein.	0.489
A0A3Q7EW13	A0A3Q7F4D1	Uncharacterized protein.	DUF641 domain-containing protein.	0.469
A0A3Q7EW13	A0A3Q7FS87	Uncharacterized protein.	GUB_WAK_bind domain-containing protein.	0.488
A0A3Q7EW13	A0A3Q7FYN2	Uncharacterized protein.	Uncharacterized protein.	0.537
A0A3Q7EW13	A0A3Q7GG26	Uncharacterized protein.	Uncharacterized protein.	0.457
A0A3Q7EW13	A0A3Q7GG69	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A3Q7EW13	A0A3Q7H2M5	Uncharacterized protein.	LEA_2 domain-containing protein.	0.474
A0A3Q7EW13	A0A3Q7HGF1	Uncharacterized protein.	Uncharacterized protein.	0.516
A0A3Q7EW13	A0A3Q7HM12	Uncharacterized protein.	Uncharacterized protein.	0.431
A0A3Q7EW13	A0A3Q7IJ94	Uncharacterized protein.	Uncharacterized protein.	0.429
A0A3Q7EW13	A0A3Q7J0E9	Uncharacterized protein.	LEA_2 domain-containing protein.	0.467
A0A3Q7EW13	A0A3Q7JHF6	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A3Q7EWI5	A0A3Q7ECU5	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A3Q7EWI5	A0A3Q7F4D1	Uncharacterized protein.	DUF641 domain-containing protein.	0.473
A0A3Q7EWI5	A0A3Q7FS87	Uncharacterized protein.	GUB_WAK_bind domain-containing protein.	0.478

page 1 of 8

Server load: low (20%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About