STRINGSTRING
A0A3Q7GMH0 A0A3Q7GMH0 UBC1 UBC1 A0A3Q7I083 A0A3Q7I083 K4BKG3_SOLLC K4BKG3_SOLLC K4BPJ6_SOLLC K4BPJ6_SOLLC K4C2D3_SOLLC K4C2D3_SOLLC K4CR01_SOLLC K4CR01_SOLLC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3Q7GMH0UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family. (1091 aa)
UBC1Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family. (230 aa)
A0A3Q7I083UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family. (1084 aa)
K4BKG3_SOLLCUBC2; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
K4BPJ6_SOLLCUBC14; Belongs to the ubiquitin-conjugating enzyme family. (165 aa)
K4C2D3_SOLLCUBC7; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
K4CR01_SOLLCUBC36; Belongs to the ubiquitin-conjugating enzyme family. (167 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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