(15 nodes) Anaphase-promoting complex-dependent catabolic process network (Solanum lycopersicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3Q7EGG5	Uncharacterized protein. (561 aa)
	A0A3Q7EPG8	RING-type domain-containing protein. (92 aa)
	A0A3Q7EYM7	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (191 aa)
	A0A3Q7F4Y6	WD_REPEATS_REGION domain-containing protein. (769 aa)
	A0A3Q7FI96	Uncharacterized protein. (99 aa)
	A0A3Q7FKX6	TPR_REGION domain-containing protein. (620 aa)
	A0A3Q7FQ14	TPR_REGION domain-containing protein. (513 aa)
	A0A3Q7GEH5	CULLIN_2 domain-containing protein; Belongs to the cullin family. (901 aa)
	Ccs52B	WD_REPEATS_REGION domain-containing protein. (499 aa)
	A0A3Q7GUQ3	APC1_C domain-containing protein. (1910 aa)
	A0A3Q7IKJ1	ANAPC5 domain-containing protein. (919 aa)
	Ccs52A	WD_REPEATS_REGION domain-containing protein. (481 aa)
	A0A3Q7IYT4	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (193 aa)
	A0A3Q7J4N2	TPR_REGION domain-containing protein. (551 aa)
	K4D303_SOLLC	UBC22; Belongs to the ubiquitin-conjugating enzyme family. (263 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7EGG5	A0A3Q7EPG8	A0A3Q7EGG5	A0A3Q7EPG8	Uncharacterized protein.	RING-type domain-containing protein.	0.983
A0A3Q7EGG5	A0A3Q7EYM7	A0A3Q7EGG5	A0A3Q7EYM7	Uncharacterized protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.991
A0A3Q7EGG5	A0A3Q7F4Y6	A0A3Q7EGG5	A0A3Q7F4Y6	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
A0A3Q7EGG5	A0A3Q7FI96	A0A3Q7EGG5	A0A3Q7FI96	Uncharacterized protein.	Uncharacterized protein.	0.972
A0A3Q7EGG5	A0A3Q7FKX6	A0A3Q7EGG5	A0A3Q7FKX6	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.972
A0A3Q7EGG5	A0A3Q7FQ14	A0A3Q7EGG5	A0A3Q7FQ14	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.989
A0A3Q7EGG5	A0A3Q7GEH5	A0A3Q7EGG5	A0A3Q7GEH5	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.998
A0A3Q7EGG5	A0A3Q7GUQ3	A0A3Q7EGG5	A0A3Q7GUQ3	Uncharacterized protein.	APC1_C domain-containing protein.	0.992
A0A3Q7EGG5	A0A3Q7IKJ1	A0A3Q7EGG5	A0A3Q7IKJ1	Uncharacterized protein.	ANAPC5 domain-containing protein.	0.998
A0A3Q7EGG5	A0A3Q7IYT4	A0A3Q7EGG5	A0A3Q7IYT4	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.950
A0A3Q7EGG5	A0A3Q7J4N2	A0A3Q7EGG5	A0A3Q7J4N2	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.994
A0A3Q7EGG5	Ccs52A	A0A3Q7EGG5	A0A3Q7IPR3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.903
A0A3Q7EGG5	Ccs52B	A0A3Q7EGG5	A0A3Q7GUK2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.924
A0A3Q7EGG5	K4D303_SOLLC	A0A3Q7EGG5	K4D303	Uncharacterized protein.	UBC22; Belongs to the ubiquitin-conjugating enzyme family.	0.960
A0A3Q7EPG8	A0A3Q7EGG5	A0A3Q7EPG8	A0A3Q7EGG5	RING-type domain-containing protein.	Uncharacterized protein.	0.983
A0A3Q7EPG8	A0A3Q7EYM7	A0A3Q7EPG8	A0A3Q7EYM7	RING-type domain-containing protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.998
A0A3Q7EPG8	A0A3Q7F4Y6	A0A3Q7EPG8	A0A3Q7F4Y6	RING-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
A0A3Q7EPG8	A0A3Q7FI96	A0A3Q7EPG8	A0A3Q7FI96	RING-type domain-containing protein.	Uncharacterized protein.	0.978
A0A3Q7EPG8	A0A3Q7FKX6	A0A3Q7EPG8	A0A3Q7FKX6	RING-type domain-containing protein.	TPR_REGION domain-containing protein.	0.978
A0A3Q7EPG8	A0A3Q7FQ14	A0A3Q7EPG8	A0A3Q7FQ14	RING-type domain-containing protein.	TPR_REGION domain-containing protein.	0.989

page 1 of 11

Server load: medium (42%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About