20 items (Solanum lycopersicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

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protein homology

Your Input:
	A0A3Q7HDU4	SFM domain-containing protein. (337 aa)
	K4CFA6_SOLLC	Prp18 domain-containing protein. (223 aa)
	A0A3Q7IPK6	Small nuclear ribonucleoprotein G. (81 aa)
	A0A3Q7I6X8	Small nuclear ribonucleoprotein Sm D2. (109 aa)
	A0A3Q7I437	WD_REPEATS_REGION domain-containing protein. (774 aa)
	A0A3Q7I1D8	MPN domain-containing protein. (2384 aa)
	A0A3Q7HYY1	Sm domain-containing protein. (98 aa)
	A0A3Q7H2J9	Pectate lyase. (602 aa)
	A0A3Q7GZB2	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	A0A3Q7GQY1	PROCT domain-containing protein. (52 aa)
	A0A3Q7GPR4	Uncharacterized protein. (330 aa)
	A0A3Q7GMS7	Small nuclear ribonucleoprotein-associated protein. (281 aa)
	A0A3Q7GL31	Small nuclear ribonucleoprotein G. (80 aa)
	A0A3Q7G001	Uncharacterized protein. (142 aa)
	A0A3Q7FQH0	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	A0A3Q7FGA6	Uncharacterized protein. (142 aa)
	A0A3Q7FFU8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7F6Y5	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7F5B7	Sm domain-containing protein. (166 aa)
	A0A3Q7EZ34	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7EZ34	A0A3Q7F5B7	A0A3Q7EZ34	A0A3Q7F5B7	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Sm domain-containing protein.	0.980
A0A3Q7EZ34	A0A3Q7F6Y5	A0A3Q7EZ34	A0A3Q7F6Y5	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
A0A3Q7EZ34	A0A3Q7FFU8	A0A3Q7EZ34	A0A3Q7FFU8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
A0A3Q7EZ34	A0A3Q7FGA6	A0A3Q7EZ34	A0A3Q7FGA6	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.961
A0A3Q7EZ34	A0A3Q7FQH0	A0A3Q7EZ34	A0A3Q7FQH0	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.990
A0A3Q7EZ34	A0A3Q7G001	A0A3Q7EZ34	A0A3Q7G001	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.961
A0A3Q7EZ34	A0A3Q7GL31	A0A3Q7EZ34	A0A3Q7GL31	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein G.	0.990
A0A3Q7EZ34	A0A3Q7GMS7	A0A3Q7EZ34	A0A3Q7GMS7	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein-associated protein.	0.980
A0A3Q7EZ34	A0A3Q7GPR4	A0A3Q7EZ34	A0A3Q7GPR4	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.663
A0A3Q7EZ34	A0A3Q7GQY1	A0A3Q7EZ34	A0A3Q7GQY1	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	PROCT domain-containing protein.	0.937
A0A3Q7EZ34	A0A3Q7GZB2	A0A3Q7EZ34	A0A3Q7GZB2	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.990
A0A3Q7EZ34	A0A3Q7H2J9	A0A3Q7EZ34	A0A3Q7H2J9	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Pectate lyase.	0.945
A0A3Q7EZ34	A0A3Q7HDU4	A0A3Q7EZ34	A0A3Q7HDU4	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	SFM domain-containing protein.	0.670
A0A3Q7EZ34	A0A3Q7HYY1	A0A3Q7EZ34	A0A3Q7HYY1	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Sm domain-containing protein.	0.987
A0A3Q7EZ34	A0A3Q7I1D8	A0A3Q7EZ34	A0A3Q7I1D8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	MPN domain-containing protein.	0.969
A0A3Q7EZ34	A0A3Q7I437	A0A3Q7EZ34	A0A3Q7I437	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	WD_REPEATS_REGION domain-containing protein.	0.670
A0A3Q7EZ34	A0A3Q7I6X8	A0A3Q7EZ34	A0A3Q7I6X8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D2.	0.997
A0A3Q7EZ34	A0A3Q7IPK6	A0A3Q7EZ34	A0A3Q7IPK6	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein G.	0.990
A0A3Q7EZ34	K4CFA6_SOLLC	A0A3Q7EZ34	K4CFA6	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Prp18 domain-containing protein.	0.670
A0A3Q7F5B7	A0A3Q7EZ34	A0A3Q7F5B7	A0A3Q7EZ34	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.980

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