STRINGSTRING
A0A3Q7GLL9 A0A3Q7GLL9 A0A3Q7E907 A0A3Q7E907 A0A3Q7EGR2 A0A3Q7EGR2 A0A3Q7EIE2 A0A3Q7EIE2 A0A3Q7EP17 A0A3Q7EP17 A0A3Q7EPG3 A0A3Q7EPG3 A0A3Q7EYR9 A0A3Q7EYR9 A0A3Q7EZ34 A0A3Q7EZ34 A0A3Q7F493 A0A3Q7F493 A0A3Q7F5B7 A0A3Q7F5B7 A0A3Q7F6K5 A0A3Q7F6K5 A0A3Q7F6Y5 A0A3Q7F6Y5 A0A3Q7F805 A0A3Q7F805 A0A3Q7F829 A0A3Q7F829 A0A3Q7F8P2 A0A3Q7F8P2 A0A3Q7F9R0 A0A3Q7F9R0 A0A3Q7F9T8 A0A3Q7F9T8 A0A3Q7FE08 A0A3Q7FE08 A0A3Q7FFH7 A0A3Q7FFH7 A0A3Q7FFU8 A0A3Q7FFU8 A0A3Q7FIQ7 A0A3Q7FIQ7 A0A3Q7FR37 A0A3Q7FR37 A0A3Q7FX15 A0A3Q7FX15 A0A3Q7G1B9 A0A3Q7G1B9 A0A3Q7G5W4 A0A3Q7G5W4 A0A3Q7GAS3 A0A3Q7GAS3 A0A3Q7GL31 A0A3Q7GL31 A0A3Q7GMS7 A0A3Q7GMS7 A0A3Q7GSY6 A0A3Q7GSY6 A0A3Q7GZ92 A0A3Q7GZ92 A0A3Q7H798 A0A3Q7H798 A0A3Q7H8E3 A0A3Q7H8E3 A0A3Q7H9U7 A0A3Q7H9U7 A0A3Q7HDU4 A0A3Q7HDU4 A0A3Q7HSK3 A0A3Q7HSK3 A0A3Q7HYL3 A0A3Q7HYL3 A0A3Q7HYY1 A0A3Q7HYY1 A0A3Q7I0H0 A0A3Q7I0H0 A0A3Q7I437 A0A3Q7I437 A0A3Q7I8V0 A0A3Q7I8V0 A0A3Q7I9V8 A0A3Q7I9V8 A0A3Q7IKZ5 A0A3Q7IKZ5 A0A3Q7IL47 A0A3Q7IL47 A0A3Q7IPK6 A0A3Q7IPK6 A0A3Q7IQI5 A0A3Q7IQI5 A0A3Q7IRU5 A0A3Q7IRU5 A0A3Q7IZM8 A0A3Q7IZM8 A0A3Q7J393 A0A3Q7J393 A0A3Q7J9K9 A0A3Q7J9K9 A0A3Q7JAW0 A0A3Q7JAW0 A0A3Q7JBI6 A0A3Q7JBI6 SlC3H61 SlC3H61 A0A3Q7JM93 A0A3Q7JM93 A0A3Q7JRX0 A0A3Q7JRX0 K4BEH9_SOLLC K4BEH9_SOLLC K4CFA6_SOLLC K4CFA6_SOLLC Q53U41_SOLLC Q53U41_SOLLC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3Q7GLL9Uncharacterized protein. (400 aa)
A0A3Q7E907RRM domain-containing protein. (123 aa)
A0A3Q7EGR2U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (199 aa)
A0A3Q7EIE2TPR_REGION domain-containing protein. (916 aa)
A0A3Q7EP17X8 domain-containing protein. (367 aa)
A0A3Q7EPG3G-patch domain-containing protein. (301 aa)
A0A3Q7EYR9U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (560 aa)
A0A3Q7EZ34Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
A0A3Q7F493Uncharacterized protein. (1255 aa)
A0A3Q7F5B7Sm domain-containing protein. (166 aa)
A0A3Q7F6K5Uncharacterized protein. (804 aa)
A0A3Q7F6Y5Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
A0A3Q7F805C3H1-type domain-containing protein. (323 aa)
A0A3Q7F829Cir_N domain-containing protein. (638 aa)
A0A3Q7F8P2MFAP1 domain-containing protein. (430 aa)
A0A3Q7F9R0RRM domain-containing protein. (478 aa)
A0A3Q7F9T8U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (559 aa)
A0A3Q7FE08Uncharacterized protein. (673 aa)
A0A3Q7FFH7PSP domain-containing protein. (591 aa)
A0A3Q7FFU8Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
A0A3Q7FIQ7Uncharacterized protein. (569 aa)
A0A3Q7FR37PSP domain-containing protein. (558 aa)
A0A3Q7FX15Uncharacterized protein. (840 aa)
A0A3Q7G1B9Uncharacterized protein. (434 aa)
A0A3Q7G5W4Uncharacterized protein. (179 aa)
A0A3Q7GAS3Uncharacterized protein. (355 aa)
A0A3Q7GL31Small nuclear ribonucleoprotein G. (80 aa)
A0A3Q7GMS7Small nuclear ribonucleoprotein-associated protein. (281 aa)
A0A3Q7GSY6Uncharacterized protein. (479 aa)
A0A3Q7GZ92Uncharacterized protein. (138 aa)
A0A3Q7H798Uncharacterized protein. (300 aa)
A0A3Q7H8E3Uncharacterized protein. (73 aa)
A0A3Q7H9U7Uncharacterized protein. (1027 aa)
A0A3Q7HDU4SFM domain-containing protein. (337 aa)
A0A3Q7HSK3Uncharacterized protein. (332 aa)
A0A3Q7HYL3Matrin-type domain-containing protein. (345 aa)
A0A3Q7HYY1Sm domain-containing protein. (98 aa)
A0A3Q7I0H0Tr-type G domain-containing protein. (987 aa)
A0A3Q7I437WD_REPEATS_REGION domain-containing protein. (774 aa)
A0A3Q7I8V0Uncharacterized protein. (521 aa)
A0A3Q7I9V8G-patch domain-containing protein. (867 aa)
A0A3Q7IKZ5Uncharacterized protein. (207 aa)
A0A3Q7IL47SF3b1 domain-containing protein. (684 aa)
A0A3Q7IPK6Small nuclear ribonucleoprotein G. (81 aa)
A0A3Q7IQI5Uncharacterized protein. (508 aa)
A0A3Q7IRU5Uncharacterized protein. (433 aa)
A0A3Q7IZM8Uncharacterized protein. (880 aa)
A0A3Q7J393Uncharacterized protein. (1135 aa)
A0A3Q7J9K9Uncharacterized protein. (66 aa)
A0A3Q7JAW0Uncharacterized protein. (693 aa)
A0A3Q7JBI6Uncharacterized protein. (68 aa)
SlC3H61Uncharacterized protein. (458 aa)
A0A3Q7JM93Uncharacterized protein. (1021 aa)
A0A3Q7JRX0Uncharacterized protein. (651 aa)
K4BEH9_SOLLCUncharacterized protein. (664 aa)
K4CFA6_SOLLCPrp18 domain-containing protein. (223 aa)
Q53U41_SOLLCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (197 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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