STRINGSTRING
A0A3Q7F6Y5 A0A3Q7F6Y5 A0A3Q7F5B7 A0A3Q7F5B7 A0A3Q7F493 A0A3Q7F493 A0A3Q7EZ34 A0A3Q7EZ34 A0A3Q7IPK6 A0A3Q7IPK6 A0A3Q7EGR2 A0A3Q7EGR2 A0A3Q7I6X8 A0A3Q7I6X8 A0A3Q7HYY1 A0A3Q7HYY1 A0A3Q7H9U7 A0A3Q7H9U7 A0A3Q7GZB2 A0A3Q7GZB2 A0A3Q7IYM3 A0A3Q7IYM3 A0A3Q7IZM8 A0A3Q7IZM8 A0A3Q7JFT1 A0A3Q7JFT1 A0A3Q7JM93 A0A3Q7JM93 Q53U41_SOLLC Q53U41_SOLLC A0A3Q7GMS7 A0A3Q7GMS7 A0A3Q7GLL9 A0A3Q7GLL9 A0A3Q7GL31 A0A3Q7GL31 A0A3Q7GAS3 A0A3Q7GAS3 A0A3Q7FQH0 A0A3Q7FQH0 A0A3Q7FFU8 A0A3Q7FFU8 A0A3Q7F9R0 A0A3Q7F9R0
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3Q7F6Y5Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
A0A3Q7F5B7Sm domain-containing protein. (166 aa)
A0A3Q7F493Uncharacterized protein. (1255 aa)
A0A3Q7EZ34Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
A0A3Q7IPK6Small nuclear ribonucleoprotein G. (81 aa)
A0A3Q7EGR2U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (199 aa)
A0A3Q7I6X8Small nuclear ribonucleoprotein Sm D2. (109 aa)
A0A3Q7HYY1Sm domain-containing protein. (98 aa)
A0A3Q7H9U7Uncharacterized protein. (1027 aa)
A0A3Q7GZB2Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
A0A3Q7IYM3Uncharacterized protein. (417 aa)
A0A3Q7IZM8Uncharacterized protein. (880 aa)
A0A3Q7JFT1Sm domain-containing protein. (88 aa)
A0A3Q7JM93Uncharacterized protein. (1021 aa)
Q53U41_SOLLCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (197 aa)
A0A3Q7GMS7Small nuclear ribonucleoprotein-associated protein. (281 aa)
A0A3Q7GLL9Uncharacterized protein. (400 aa)
A0A3Q7GL31Small nuclear ribonucleoprotein G. (80 aa)
A0A3Q7GAS3Uncharacterized protein. (355 aa)
A0A3Q7FQH0Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
A0A3Q7FFU8Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
A0A3Q7F9R0RRM domain-containing protein. (478 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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