29 items (Solanum lycopersicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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protein homology

Your Input:
	A0A3Q7F6K5	Uncharacterized protein. (804 aa)
	A0A3Q7J4E0	Uncharacterized protein. (95 aa)
	A0A3Q7IRU5	Uncharacterized protein. (433 aa)
	A0A3Q7IQI5	Uncharacterized protein. (508 aa)
	A0A3Q7IPK6	Small nuclear ribonucleoprotein G. (81 aa)
	A0A3Q7IL51	CPSF_A domain-containing protein. (1393 aa)
	A0A3Q7IL47	SF3b1 domain-containing protein. (684 aa)
	A0A3Q7IKZ5	Uncharacterized protein. (207 aa)
	A0A3Q7I6X8	Small nuclear ribonucleoprotein Sm D2. (109 aa)
	A0A3Q7HYY1	Sm domain-containing protein. (98 aa)
	A0A3Q7HYL3	Matrin-type domain-containing protein. (345 aa)
	A0A3Q7HQA1	Splicing factor subunit; Belongs to the SF3B5 family. (87 aa)
	A0A3Q7H8E3	Uncharacterized protein. (73 aa)
	A0A3Q7GZB2	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	A0A3Q7GMS7	Small nuclear ribonucleoprotein-associated protein. (281 aa)
	A0A3Q7GL31	Small nuclear ribonucleoprotein G. (80 aa)
	A0A3Q7G1B9	Uncharacterized protein. (434 aa)
	A0A3Q7G0H3	CPSF_A domain-containing protein. (1175 aa)
	A0A3Q7FZS6	Uncharacterized protein. (635 aa)
	A0A3Q7FX15	Uncharacterized protein. (840 aa)
	A0A3Q7FUZ6	Uncharacterized protein. (398 aa)
	A0A3Q7FR37	PSP domain-containing protein. (558 aa)
	A0A3Q7FQH0	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	A0A3Q7FFU8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7FFH7	PSP domain-containing protein. (591 aa)
	A0A3Q7F6Y5	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7F5B7	Sm domain-containing protein. (166 aa)
	A0A3Q7EZ34	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7E907	RRM domain-containing protein. (123 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3Q7E907	A0A3Q7EZ34	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.962
A0A3Q7E907	A0A3Q7F5B7	RRM domain-containing protein.	Sm domain-containing protein.	0.925
A0A3Q7E907	A0A3Q7F6K5	RRM domain-containing protein.	Uncharacterized protein.	0.919
A0A3Q7E907	A0A3Q7F6Y5	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.962
A0A3Q7E907	A0A3Q7FFH7	RRM domain-containing protein.	PSP domain-containing protein.	0.997
A0A3Q7E907	A0A3Q7FFU8	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.962
A0A3Q7E907	A0A3Q7FQH0	RRM domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.991
A0A3Q7E907	A0A3Q7FR37	RRM domain-containing protein.	PSP domain-containing protein.	0.989
A0A3Q7E907	A0A3Q7FUZ6	RRM domain-containing protein.	Uncharacterized protein.	0.888
A0A3Q7E907	A0A3Q7FX15	RRM domain-containing protein.	Uncharacterized protein.	0.919
A0A3Q7E907	A0A3Q7FZS6	RRM domain-containing protein.	Uncharacterized protein.	0.988
A0A3Q7E907	A0A3Q7G0H3	RRM domain-containing protein.	CPSF_A domain-containing protein.	0.997
A0A3Q7E907	A0A3Q7G1B9	RRM domain-containing protein.	Uncharacterized protein.	0.832
A0A3Q7E907	A0A3Q7GL31	RRM domain-containing protein.	Small nuclear ribonucleoprotein G.	0.988
A0A3Q7E907	A0A3Q7GMS7	RRM domain-containing protein.	Small nuclear ribonucleoprotein-associated protein.	0.925
A0A3Q7E907	A0A3Q7GZB2	RRM domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.991
A0A3Q7E907	A0A3Q7H8E3	RRM domain-containing protein.	Uncharacterized protein.	0.987
A0A3Q7E907	A0A3Q7HQA1	RRM domain-containing protein.	Splicing factor subunit; Belongs to the SF3B5 family.	0.998
A0A3Q7E907	A0A3Q7HYL3	RRM domain-containing protein.	Matrin-type domain-containing protein.	0.996
A0A3Q7E907	A0A3Q7HYY1	RRM domain-containing protein.	Sm domain-containing protein.	0.969

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