STRINGSTRING
CrtR-b2 CrtR-b2 NCED1 NCED1 LeCCD1B LeCCD1B A0A3Q7EIX5 A0A3Q7EIX5 A0A3Q7EKZ3 A0A3Q7EKZ3 A0A3Q7EZ40 A0A3Q7EZ40 A0A3Q7FC15 A0A3Q7FC15 A0A3Q7FG51 A0A3Q7FG51 A0A3Q7G4Z4 A0A3Q7G4Z4 A0A3Q7GZS7 A0A3Q7GZS7 A0A3Q7HY98 A0A3Q7HY98 A0A3Q7IK81 A0A3Q7IK81 CrtL-e-1 CrtL-e-1 VDE VDE CYP97A29 CYP97A29 NSY NSY NXD1 NXD1 CRTL-E-1 CRTL-E-1 ZEP ZEP LCY1 LCY1 CCD1A CCD1A CrtR-b1 CrtR-b1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
CrtR-b2Carotene beta-hydroxylase; Belongs to the sterol desaturase family. (314 aa)
NCED19-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic; Has a 11,12(11',12') 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid (ABA) biosynthesis from carotenoids. Required for ABA accumulation upon drought. Required for ABA-mediated regulation of anther/pollen development, including metabolism, cell wall modification and transcription level. Positive regulator of fruit ripening involved in the biosynthesis of abscisic acid (ABA); initiates ABA biosynthesis at the onset of fruit ripening. Modulates the degree of pigmentation and carotenoid composition a [...] (605 aa)
LeCCD1BUncharacterized protein. (197 aa)
A0A3Q7EIX5Uncharacterized protein. (86 aa)
A0A3Q7EKZ3MFS domain-containing protein. (606 aa)
A0A3Q7EZ40Uncharacterized protein. (246 aa)
A0A3Q7FC15Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. (684 aa)
A0A3Q7FG51Uncharacterized protein. (236 aa)
A0A3Q7G4Z4VDE domain-containing protein. (534 aa)
A0A3Q7GZS7Uncharacterized protein; Belongs to the synaptobrevin family. (651 aa)
A0A3Q7HY98RING-type domain-containing protein. (175 aa)
A0A3Q7IK81Uncharacterized protein. (500 aa)
CrtL-e-1Uncharacterized protein. (537 aa)
VDEViolaxanthin de-epoxidase; Belongs to the calycin superfamily. Lipocalin family. (478 aa)
CYP97A29Cytochrome P450-type monooxygenase 97A29; Belongs to the cytochrome P450 family. (605 aa)
NSYNeoxanthin synthase, chloroplastic; Involved in the synthesis of neoxanthin, the last product of carotenoid synthesis and a precursor of abscisic acid. Involved in the beta-carotene biosynthesis ; Belongs to the lycopene cyclase family. (498 aa)
NXD1Protein NEOXANTHIN-DEFICIENT 1; Required for neoxanthin biosynthesis. Probably not involved directly in the enzymatic conversion of violaxanthin to neoxanthin. Is necessary but not sufficient for neoxanthin synthesis. Seems not required for abscisic acid (ABA) biosynthesis in response to drought stress. (295 aa)
CRTL-E-1Lycopene epsilon cyclase, chloroplastic; Catalyzes the single cyclization reaction which converts lycopene to delta-carotene and neurosporene to alpha-zeacarotene. Required for lutein biosynthesis. (526 aa)
ZEPZeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin. Involved in the epoxidation of zeaxanthin. Plays an important role in resistance to stresses, seed development and dormancy. (669 aa)
LCY1Lycopene beta cyclase, chloroplastic; Catalyzes the double cyclization reaction which converts lycopene to beta-carotene and neurosporene to beta-zeacarotene. (500 aa)
CCD1ACarotenoid cleavage dioxygenase 1A. (545 aa)
CrtR-b1Beta-carotene hydroxylase; Belongs to the sterol desaturase family. (309 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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