STRINGSTRING
A0A3Q7GMS7 A0A3Q7GMS7 A0A3Q7GKV0 A0A3Q7GKV0 A0A3Q7G2B1 A0A3Q7G2B1 A0A3Q7G001 A0A3Q7G001 A0A3Q7FQH0 A0A3Q7FQH0 A0A3Q7HM61 A0A3Q7HM61 A0A3Q7HUR2 A0A3Q7HUR2 A0A3Q7I0H0 A0A3Q7I0H0 A0A3Q7FID0 A0A3Q7FID0 A0A3Q7FGA6 A0A3Q7FGA6 A0A3Q7F5B7 A0A3Q7F5B7 A0A3Q7ENM0 A0A3Q7ENM0 A0A3Q7END7 A0A3Q7END7 K4CRG8_SOLLC K4CRG8_SOLLC A0A3Q7EKF9 A0A3Q7EKF9 A0A3Q7GP12 A0A3Q7GP12 A0A3Q7GZB2 A0A3Q7GZB2 A0A3Q7H2J9 A0A3Q7H2J9 A0A3Q7I437 A0A3Q7I437 A0A3Q7I6B1 A0A3Q7I6B1 A0A3Q7I6X8 A0A3Q7I6X8 A0A3Q7I980 A0A3Q7I980 A0A3Q7IJG1 A0A3Q7IJG1 A0A3Q7INH3 A0A3Q7INH3 A0A3Q7IQD7 A0A3Q7IQD7 K4AZH1_SOLLC K4AZH1_SOLLC K4CFA6_SOLLC K4CFA6_SOLLC A0A3Q7H2V6 A0A3Q7H2V6 A0A3Q7H5E5 A0A3Q7H5E5 A0A3Q7HDU4 A0A3Q7HDU4 A0A3Q7HI28 A0A3Q7HI28
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A3Q7GMS7Small nuclear ribonucleoprotein-associated protein. (281 aa)
A0A3Q7GKV0Uncharacterized protein. (549 aa)
A0A3Q7G2B1WD_REPEATS_REGION domain-containing protein. (580 aa)
A0A3Q7G001Uncharacterized protein. (142 aa)
A0A3Q7FQH0Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
A0A3Q7HM61Uncharacterized protein. (678 aa)
A0A3Q7HUR2Nop domain-containing protein. (483 aa)
A0A3Q7I0H0Tr-type G domain-containing protein. (987 aa)
A0A3Q7FID0Sm domain-containing protein. (146 aa)
A0A3Q7FGA6Uncharacterized protein. (142 aa)
A0A3Q7F5B7Sm domain-containing protein. (166 aa)
A0A3Q7ENM0U1-type domain-containing protein. (202 aa)
A0A3Q7END7Uncharacterized protein. (278 aa)
K4CRG8_SOLLCRibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
A0A3Q7EKF9Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (85 aa)
A0A3Q7GP12Uncharacterized protein. (252 aa)
A0A3Q7GZB2Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
A0A3Q7H2J9Pectate lyase. (602 aa)
A0A3Q7I437WD_REPEATS_REGION domain-containing protein. (774 aa)
A0A3Q7I6B1Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
A0A3Q7I6X8Small nuclear ribonucleoprotein Sm D2. (109 aa)
A0A3Q7I980Uncharacterized protein. (980 aa)
A0A3Q7IJG1Sm domain-containing protein. (90 aa)
A0A3Q7INH3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
A0A3Q7IQD7Uncharacterized protein. (1388 aa)
K4AZH1_SOLLCNop domain-containing protein. (217 aa)
K4CFA6_SOLLCPrp18 domain-containing protein. (223 aa)
A0A3Q7H2V6U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A3Q7H5E5Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
A0A3Q7HDU4SFM domain-containing protein. (337 aa)
A0A3Q7HI28Nop domain-containing protein. (399 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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