(19 nodes) SAGA-type complex network (Solanum lycopersicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3Q7FU51	Uncharacterized protein. (418 aa)
	A0A3Q7FDZ4	SGF29 C-terminal domain-containing protein. (268 aa)
	A0A3Q7FW01	TFIID_20kDa domain-containing protein. (519 aa)
	A0A3Q7F8Y5	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3913 aa)
	A0A3Q7F2G9	Uncharacterized protein. (62 aa)
	A0A3Q7EZD9	Uncharacterized protein. (329 aa)
	A0A3Q7ES53	Uncharacterized protein. (392 aa)
	A0A3Q7FZ83	Uncharacterized protein. (183 aa)
	A0A3Q7GVT5	Uncharacterized protein. (92 aa)
	A0A3Q7GX14	Uncharacterized protein. (469 aa)
	A0A3Q7GY38	TFIID_20kDa domain-containing protein. (170 aa)
	A0A3Q7H3V4	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (608 aa)
	A0A3Q7H4N6	SAGA-associated factor 11. (176 aa)
	A0A3Q7HFS0	TAF domain-containing protein. (560 aa)
	A0A3Q7ILB4	Ubiquitinyl hydrolase 1. (549 aa)
	A0A3Q7JCU0	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. (138 aa)
	K4CKX2_SOLLC	UBP-type domain-containing protein. (179 aa)
	A0A3Q7HXI4	TFIID_20kDa domain-containing protein. (768 aa)
	A0A3Q7IBB8	TAF domain-containing protein. (547 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7ES53	A0A3Q7EZD9	A0A3Q7ES53	A0A3Q7EZD9	Uncharacterized protein.	Uncharacterized protein.	0.560
A0A3Q7ES53	A0A3Q7F2G9	A0A3Q7ES53	A0A3Q7F2G9	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A3Q7ES53	A0A3Q7F8Y5	A0A3Q7ES53	A0A3Q7F8Y5	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.835
A0A3Q7ES53	A0A3Q7FDZ4	A0A3Q7ES53	A0A3Q7FDZ4	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.790
A0A3Q7ES53	A0A3Q7FU51	A0A3Q7ES53	A0A3Q7FU51	Uncharacterized protein.	Uncharacterized protein.	0.568
A0A3Q7ES53	A0A3Q7FW01	A0A3Q7ES53	A0A3Q7FW01	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.663
A0A3Q7ES53	A0A3Q7FZ83	A0A3Q7ES53	A0A3Q7FZ83	Uncharacterized protein.	Uncharacterized protein.	0.823
A0A3Q7ES53	A0A3Q7GVT5	A0A3Q7ES53	A0A3Q7GVT5	Uncharacterized protein.	Uncharacterized protein.	0.663
A0A3Q7ES53	A0A3Q7GX14	A0A3Q7ES53	A0A3Q7GX14	Uncharacterized protein.	Uncharacterized protein.	0.581
A0A3Q7ES53	A0A3Q7GY38	A0A3Q7ES53	A0A3Q7GY38	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.663
A0A3Q7ES53	A0A3Q7H4N6	A0A3Q7ES53	A0A3Q7H4N6	Uncharacterized protein.	SAGA-associated factor 11.	0.852
A0A3Q7ES53	A0A3Q7HFS0	A0A3Q7ES53	A0A3Q7HFS0	Uncharacterized protein.	TAF domain-containing protein.	0.619
A0A3Q7ES53	A0A3Q7HXI4	A0A3Q7ES53	A0A3Q7HXI4	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.513
A0A3Q7ES53	A0A3Q7IBB8	A0A3Q7ES53	A0A3Q7IBB8	Uncharacterized protein.	TAF domain-containing protein.	0.619
A0A3Q7ES53	A0A3Q7JCU0	A0A3Q7ES53	A0A3Q7JCU0	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.806
A0A3Q7EZD9	A0A3Q7ES53	A0A3Q7EZD9	A0A3Q7ES53	Uncharacterized protein.	Uncharacterized protein.	0.560
A0A3Q7EZD9	A0A3Q7F2G9	A0A3Q7EZD9	A0A3Q7F2G9	Uncharacterized protein.	Uncharacterized protein.	0.664
A0A3Q7EZD9	A0A3Q7F8Y5	A0A3Q7EZD9	A0A3Q7F8Y5	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.835
A0A3Q7EZD9	A0A3Q7FDZ4	A0A3Q7EZD9	A0A3Q7FDZ4	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.790
A0A3Q7EZD9	A0A3Q7FU51	A0A3Q7EZD9	A0A3Q7FU51	Uncharacterized protein.	Uncharacterized protein.	0.557

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