70 items (Solanum lycopersicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3Q7E907	RRM domain-containing protein. (123 aa)
	A0A3Q7EIE2	TPR_REGION domain-containing protein. (916 aa)
	A0A3Q7EKX1	WD_REPEATS_REGION domain-containing protein. (505 aa)
	A0A3Q7ES18	Pinin_SDK_memA domain-containing protein. (414 aa)
	A0A3Q7EUD5	Uncharacterized protein. (1170 aa)
	A0A3Q7EZ34	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7F0F1	Uncharacterized protein. (1588 aa)
	A0A3Q7F0N6	Uncharacterized protein; Belongs to the DEAD box helicase family. (662 aa)
	A0A3Q7F4B9	WD_REPEATS_REGION domain-containing protein. (541 aa)
	A0A3Q7F5B7	Sm domain-containing protein. (166 aa)
	A0A3Q7F5J3	Uncharacterized protein; Belongs to the DEAD box helicase family. (644 aa)
	A0A3Q7F6K5	Uncharacterized protein. (804 aa)
	A0A3Q7F6Y5	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7FB13	Uncharacterized protein. (619 aa)
	A0A3Q7FE08	Uncharacterized protein. (673 aa)
	A0A3Q7FFH7	PSP domain-containing protein. (591 aa)
	A0A3Q7FFU8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7FH48	CCHC-type domain-containing protein. (530 aa)
	A0A3Q7FI09	WD_REPEATS_REGION domain-containing protein. (391 aa)
	A0A3Q7FID0	Sm domain-containing protein. (146 aa)
	A0A3Q7FR37	PSP domain-containing protein. (558 aa)
	A0A3Q7FSF4	MI domain-containing protein. (464 aa)
	A0A3Q7FST2	Uncharacterized protein. (264 aa)
	A0A3Q7FUA6	WD_REPEATS_REGION domain-containing protein. (566 aa)
	A0A3Q7FX15	Uncharacterized protein. (840 aa)
	A0A3Q7G1B9	Uncharacterized protein. (434 aa)
	A0A3Q7G5W4	Uncharacterized protein. (179 aa)
	A0A3Q7GL31	Small nuclear ribonucleoprotein G. (80 aa)
	A0A3Q7GLS7	MI domain-containing protein. (520 aa)
	A0A3Q7GMS7	Small nuclear ribonucleoprotein-associated protein. (281 aa)
	A0A3Q7GQY1	PROCT domain-containing protein. (52 aa)
	A0A3Q7GSY6	Uncharacterized protein. (479 aa)
	A0A3Q7H2L6	MI domain-containing protein. (850 aa)
	A0A3Q7H5E5	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
	A0A3Q7H7U0	Uncharacterized protein. (1119 aa)
	A0A3Q7H8E3	Uncharacterized protein. (73 aa)
	A0A3Q7HBH3	Uncharacterized protein. (196 aa)
	A0A3Q7HF18	Uncharacterized protein. (310 aa)
	A0A3Q7HIJ1	Uncharacterized protein. (176 aa)
	A0A3Q7HJ19	MI domain-containing protein. (773 aa)
	A0A3Q7HJI7	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (160 aa)
	A0A3Q7HMK8	PPIase cyclophilin-type domain-containing protein. (492 aa)
	A0A3Q7HRG7	Uncharacterized protein. (178 aa)
	A0A3Q7HYL3	Matrin-type domain-containing protein. (345 aa)
	A0A3Q7HYY1	Sm domain-containing protein. (98 aa)
	A0A3Q7HZM9	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa)
	A0A3Q7I0H0	Tr-type G domain-containing protein. (987 aa)
	A0A3Q7I1D8	MPN domain-containing protein. (2384 aa)
	A0A3Q7I6B1	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
	A0A3Q7I6X8	Small nuclear ribonucleoprotein Sm D2. (109 aa)
	A0A3Q7I7G2	Uncharacterized protein. (512 aa)
	A0A3Q7I980	Uncharacterized protein. (980 aa)
	A0A3Q7I9N9	Uncharacterized protein. (232 aa)
	A0A3Q7IIR9	Uncharacterized protein. (310 aa)
	A0A3Q7IKZ5	Uncharacterized protein. (207 aa)
	A0A3Q7IL47	SF3b1 domain-containing protein. (684 aa)
	A0A3Q7INH3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
	A0A3Q7INK9	WD_REPEATS_REGION domain-containing protein. (299 aa)
	A0A3Q7IPK6	Small nuclear ribonucleoprotein G. (81 aa)
	A0A3Q7IRU5	Uncharacterized protein. (433 aa)
	A0A3Q7IU05	WD_REPEATS_REGION domain-containing protein. (163 aa)
	A0A3Q7IVC4	Uncharacterized protein. (409 aa)
	A0A3Q7IZ39	Uncharacterized protein. (622 aa)
	A0A3Q7J8M0	WD_REPEATS_REGION domain-containing protein. (581 aa)
	A0A3Q7J9K9	Uncharacterized protein. (66 aa)
	A0A3Q7JAW0	Uncharacterized protein. (693 aa)
	A0A3Q7JBI6	Uncharacterized protein. (68 aa)
	SlC3H61	Uncharacterized protein. (458 aa)
	A0A3Q7JFT1	Sm domain-containing protein. (88 aa)
	K4BEH9_SOLLC	Uncharacterized protein. (664 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7E907	A0A3Q7EIE2	A0A3Q7E907	A0A3Q7EIE2	RRM domain-containing protein.	TPR_REGION domain-containing protein.	0.606
A0A3Q7E907	A0A3Q7EKX1	A0A3Q7E907	A0A3Q7EKX1	RRM domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.584
A0A3Q7E907	A0A3Q7EZ34	A0A3Q7E907	A0A3Q7EZ34	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.962
A0A3Q7E907	A0A3Q7F0F1	A0A3Q7E907	A0A3Q7F0F1	RRM domain-containing protein.	Uncharacterized protein.	0.799
A0A3Q7E907	A0A3Q7F0N6	A0A3Q7E907	A0A3Q7F0N6	RRM domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.697
A0A3Q7E907	A0A3Q7F4B9	A0A3Q7E907	A0A3Q7F4B9	RRM domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.618
A0A3Q7E907	A0A3Q7F5B7	A0A3Q7E907	A0A3Q7F5B7	RRM domain-containing protein.	Sm domain-containing protein.	0.925
A0A3Q7E907	A0A3Q7F5J3	A0A3Q7E907	A0A3Q7F5J3	RRM domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.697
A0A3Q7E907	A0A3Q7F6K5	A0A3Q7E907	A0A3Q7F6K5	RRM domain-containing protein.	Uncharacterized protein.	0.919
A0A3Q7E907	A0A3Q7F6Y5	A0A3Q7E907	A0A3Q7F6Y5	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.962
A0A3Q7E907	A0A3Q7FB13	A0A3Q7E907	A0A3Q7FB13	RRM domain-containing protein.	Uncharacterized protein.	0.777
A0A3Q7E907	A0A3Q7FE08	A0A3Q7E907	A0A3Q7FE08	RRM domain-containing protein.	Uncharacterized protein.	0.552
A0A3Q7E907	A0A3Q7FFH7	A0A3Q7E907	A0A3Q7FFH7	RRM domain-containing protein.	PSP domain-containing protein.	0.997
A0A3Q7E907	A0A3Q7FFU8	A0A3Q7E907	A0A3Q7FFU8	RRM domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.962
A0A3Q7E907	A0A3Q7FI09	A0A3Q7E907	A0A3Q7FI09	RRM domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.646
A0A3Q7E907	A0A3Q7FID0	A0A3Q7E907	A0A3Q7FID0	RRM domain-containing protein.	Sm domain-containing protein.	0.573
A0A3Q7E907	A0A3Q7FR37	A0A3Q7E907	A0A3Q7FR37	RRM domain-containing protein.	PSP domain-containing protein.	0.989
A0A3Q7E907	A0A3Q7FSF4	A0A3Q7E907	A0A3Q7FSF4	RRM domain-containing protein.	MI domain-containing protein.	0.574
A0A3Q7E907	A0A3Q7FST2	A0A3Q7E907	A0A3Q7FST2	RRM domain-containing protein.	Uncharacterized protein.	0.795
A0A3Q7E907	A0A3Q7FUA6	A0A3Q7E907	A0A3Q7FUA6	RRM domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.646

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