18 items (Solanum lycopersicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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Others

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protein homology

Your Input:
	A0A3Q7H590	RING-type domain-containing protein. (431 aa)
	A0A3Q7EDD4	Uncharacterized protein. (132 aa)
	A0A3Q7EZ34	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7F6Y5	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7FFU8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7FKZ3	Uncharacterized protein. (599 aa)
	A0A3Q7FUV3	Uncharacterized protein. (820 aa)
	A0A3Q7GL31	Small nuclear ribonucleoprotein G. (80 aa)
	A0A3Q7HJK9	RING-type domain-containing protein. (418 aa)
	A0A3Q7HYY1	Sm domain-containing protein. (98 aa)
	A0A3Q7I4K2	RING-type domain-containing protein. (430 aa)
	A0A3Q7I508	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (115 aa)
	A0A3Q7I6T6	Uncharacterized protein. (213 aa)
	A0A3Q7I8L6	Uncharacterized protein. (199 aa)
	A0A3Q7IPK6	Small nuclear ribonucleoprotein G. (81 aa)
	A0A3Q7J7E9	Uncharacterized protein. (222 aa)
	K4C5Y6_SOLLC	Uncharacterized protein. (176 aa)
	K4DDP0_SOLLC	Uncharacterized protein. (222 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7EDD4	A0A3Q7EZ34	A0A3Q7EDD4	A0A3Q7EZ34	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.540
A0A3Q7EDD4	A0A3Q7F6Y5	A0A3Q7EDD4	A0A3Q7F6Y5	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.540
A0A3Q7EDD4	A0A3Q7FFU8	A0A3Q7EDD4	A0A3Q7FFU8	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.540
A0A3Q7EDD4	A0A3Q7FKZ3	A0A3Q7EDD4	A0A3Q7FKZ3	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A3Q7EDD4	A0A3Q7FUV3	A0A3Q7EDD4	A0A3Q7FUV3	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A3Q7EDD4	A0A3Q7GL31	A0A3Q7EDD4	A0A3Q7GL31	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.540
A0A3Q7EDD4	A0A3Q7HYY1	A0A3Q7EDD4	A0A3Q7HYY1	Uncharacterized protein.	Sm domain-containing protein.	0.540
A0A3Q7EDD4	A0A3Q7I508	A0A3Q7EDD4	A0A3Q7I508	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.540
A0A3Q7EDD4	A0A3Q7IPK6	A0A3Q7EDD4	A0A3Q7IPK6	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.540
A0A3Q7EDD4	K4C5Y6_SOLLC	A0A3Q7EDD4	K4C5Y6	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A3Q7EZ34	A0A3Q7EDD4	A0A3Q7EZ34	A0A3Q7EDD4	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.540
A0A3Q7EZ34	A0A3Q7F6Y5	A0A3Q7EZ34	A0A3Q7F6Y5	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
A0A3Q7EZ34	A0A3Q7FFU8	A0A3Q7EZ34	A0A3Q7FFU8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
A0A3Q7EZ34	A0A3Q7FKZ3	A0A3Q7EZ34	A0A3Q7FKZ3	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.540
A0A3Q7EZ34	A0A3Q7FUV3	A0A3Q7EZ34	A0A3Q7FUV3	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.588
A0A3Q7EZ34	A0A3Q7GL31	A0A3Q7EZ34	A0A3Q7GL31	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein G.	0.990
A0A3Q7EZ34	A0A3Q7HYY1	A0A3Q7EZ34	A0A3Q7HYY1	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Sm domain-containing protein.	0.987
A0A3Q7EZ34	A0A3Q7I508	A0A3Q7EZ34	A0A3Q7I508	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.	0.987
A0A3Q7EZ34	A0A3Q7IPK6	A0A3Q7EZ34	A0A3Q7IPK6	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein G.	0.990
A0A3Q7EZ34	K4C5Y6_SOLLC	A0A3Q7EZ34	K4C5Y6	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.588

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