(61 nodes) Kelch-type beta propeller network (Solanum lycopersicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G8Z292_SOLLC	Serine/threonine-protein phosphatase. (982 aa)
	SLF1	S-locus F-box protein type-1. (389 aa)
	A0A3Q7JEX4	Guanylate kinase-like domain-containing protein. (405 aa)
	K4CEX1_SOLLC	Uncharacterized protein. (302 aa)
	K4CFZ9_SOLLC	Uncharacterized protein. (371 aa)
	K4CM71_SOLLC	Uncharacterized protein. (298 aa)
	AN	ANANTHA. (455 aa)
	A0A3Q7JI35	Uncharacterized protein. (501 aa)
	K4DAR5_SOLLC	F-box domain-containing protein. (400 aa)
	K4CY30_SOLLC	Uncharacterized protein. (339 aa)
	LTM	Late termination. (652 aa)
	A0A3Q7E771	PAS domain-containing protein. (589 aa)
	A0A3Q7E7K4	F-box domain-containing protein. (437 aa)
	A0A3Q7EGJ6	Uncharacterized protein. (700 aa)
	A0A3Q7EIG0	Uncharacterized protein. (394 aa)
	A0A3Q7EKV5	F-box domain-containing protein. (399 aa)
	A0A3Q7EQP2	F-box domain-containing protein. (474 aa)
	A0A3Q7EVX1	F-box domain-containing protein. (402 aa)
	A0A3Q7EW88	F-box domain-containing protein. (437 aa)
	A0A3Q7F473	Uncharacterized protein. (367 aa)
	A0A3Q7F802	ACB domain-containing protein. (669 aa)
	A0A3Q7FBL5	F-box domain-containing protein. (438 aa)
	A0A3Q7FC16	Uncharacterized protein. (417 aa)
	A0A3Q7FNT5	Uncharacterized protein. (302 aa)
	A0A3Q7FTG5	Uncharacterized protein. (542 aa)
	A0A3Q7FTI1	F-box domain-containing protein. (361 aa)
	A0A3Q7FTJ8	F-box domain-containing protein. (368 aa)
	A0A3Q7FV83	Uncharacterized protein. (453 aa)
	A0A3Q7FWQ4	Uncharacterized protein. (355 aa)
	A0A3Q7FY20	Uncharacterized protein. (409 aa)
	A0A3Q7G5J7	F-box domain-containing protein. (316 aa)
	A0A3Q7G7D7	F-box domain-containing protein. (377 aa)
	A0A3Q7G9V5	Uncharacterized protein. (196 aa)
	A0A3Q7GA61	Uncharacterized protein. (699 aa)
	A0A3Q7GB58	F-box domain-containing protein. (583 aa)
	A0A3Q7GCC7	F-box domain-containing protein. (370 aa)
	A0A3Q7GDX2	F-box domain-containing protein. (466 aa)
	A0A3Q7GF62	Uncharacterized protein. (532 aa)
	A0A3Q7GJ82	Uncharacterized protein. (326 aa)
	A0A3Q7GLB0	SAM_MT_TRM5_TYW2 domain-containing protein. (1038 aa)
	A0A3Q7GM83	Reverse transcriptase Ty1/copia-type domain-containing protein. (518 aa)
	A0A3Q7GN38	Uncharacterized protein. (345 aa)
	A0A3Q7GV34	F-box domain-containing protein. (465 aa)
	A0A3Q7GVG7	Uncharacterized protein. (169 aa)
	A0A3Q7H2L4	Serine/threonine-protein phosphatase. (994 aa)
	A0A3Q7H4W1	Bulb-type lectin domain-containing protein. (569 aa)
	A0A3Q7H934	Uncharacterized protein. (437 aa)
	A0A3Q7H967	F-box domain-containing protein. (540 aa)
	A0A3Q7HSP8	Uncharacterized protein. (396 aa)
	A0A3Q7HSX8	F-box domain-containing protein. (367 aa)
	A0A3Q7I1A3	Uncharacterized protein. (807 aa)
	A0A3Q7IDT8	Uncharacterized protein. (386 aa)
	A0A3Q7IIR8	DCD domain-containing protein. (562 aa)
	A0A3Q7IIX1	Uncharacterized protein. (292 aa)
	A0A3Q7IKV2	F-box domain-containing protein. (344 aa)
	A0A3Q7IR77	Uncharacterized protein. (492 aa)
	A0A3Q7IZP0	Protein kinase domain-containing protein. (723 aa)
	A0A3Q7J015	F-box domain-containing protein. (345 aa)
	A0A3Q7J0F5	Uncharacterized protein. (415 aa)
	A0A3Q7J0U6	Serine/threonine-protein phosphatase. (1073 aa)
	BSL1	Serine/threonine-protein phosphatase. (845 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7E7K4	A0A3Q7GCC7	A0A3Q7E7K4	A0A3Q7GCC7	F-box domain-containing protein.	F-box domain-containing protein.	0.451
A0A3Q7EIG0	A0A3Q7GDX2	A0A3Q7EIG0	A0A3Q7GDX2	Uncharacterized protein.	F-box domain-containing protein.	0.405
A0A3Q7EKV5	A0A3Q7FWQ4	A0A3Q7EKV5	A0A3Q7FWQ4	F-box domain-containing protein.	Uncharacterized protein.	0.463
A0A3Q7EW88	A0A3Q7GCC7	A0A3Q7EW88	A0A3Q7GCC7	F-box domain-containing protein.	F-box domain-containing protein.	0.451
A0A3Q7FBL5	SLF1	A0A3Q7FBL5	K4AVI6	F-box domain-containing protein.	S-locus F-box protein type-1.	0.407
A0A3Q7FWQ4	A0A3Q7EKV5	A0A3Q7FWQ4	A0A3Q7EKV5	Uncharacterized protein.	F-box domain-containing protein.	0.463
A0A3Q7G7D7	A0A3Q7GB58	A0A3Q7G7D7	A0A3Q7GB58	F-box domain-containing protein.	F-box domain-containing protein.	0.474
A0A3Q7G7D7	K4CEX1_SOLLC	A0A3Q7G7D7	K4CEX1	F-box domain-containing protein.	Uncharacterized protein.	0.427
A0A3Q7GB58	A0A3Q7G7D7	A0A3Q7GB58	A0A3Q7G7D7	F-box domain-containing protein.	F-box domain-containing protein.	0.474
A0A3Q7GCC7	A0A3Q7E7K4	A0A3Q7GCC7	A0A3Q7E7K4	F-box domain-containing protein.	F-box domain-containing protein.	0.451
A0A3Q7GCC7	A0A3Q7EW88	A0A3Q7GCC7	A0A3Q7EW88	F-box domain-containing protein.	F-box domain-containing protein.	0.451
A0A3Q7GCC7	A0A3Q7IKV2	A0A3Q7GCC7	A0A3Q7IKV2	F-box domain-containing protein.	F-box domain-containing protein.	0.465
A0A3Q7GDX2	A0A3Q7EIG0	A0A3Q7GDX2	A0A3Q7EIG0	F-box domain-containing protein.	Uncharacterized protein.	0.405
A0A3Q7GDX2	SLF1	A0A3Q7GDX2	K4AVI6	F-box domain-containing protein.	S-locus F-box protein type-1.	0.411
A0A3Q7IKV2	A0A3Q7GCC7	A0A3Q7IKV2	A0A3Q7GCC7	F-box domain-containing protein.	F-box domain-containing protein.	0.465
K4CEX1_SOLLC	A0A3Q7G7D7	K4CEX1	A0A3Q7G7D7	Uncharacterized protein.	F-box domain-containing protein.	0.427
SLF1	A0A3Q7FBL5	K4AVI6	A0A3Q7FBL5	S-locus F-box protein type-1.	F-box domain-containing protein.	0.407
SLF1	A0A3Q7GDX2	K4AVI6	A0A3Q7GDX2	S-locus F-box protein type-1.	F-box domain-containing protein.	0.411

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