(10 nodes) TFIIS/LEDGF domain superfamily network (Solanum lycopersicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A3Q7FQ73	Uncharacterized protein. (1602 aa)
	A0A3Q7G7L4	TFIIS N-terminal domain-containing protein. (244 aa)
	A0A3Q7GBP4	Uncharacterized protein. (381 aa)
	A0A3Q7GJ79	TFIIS N-terminal domain-containing protein. (255 aa)
	A0A3Q7GX73	TFIIS N-terminal domain-containing protein. (523 aa)
	A0A3Q7HUE3	Uncharacterized protein. (1695 aa)
	A0A3Q7IJD6	TFIIS N-terminal domain-containing protein. (409 aa)
	A0A3Q7ILS5	TFIIS N-terminal domain-containing protein. (455 aa)
	A0A3Q7IPW6	TFIIS N-terminal domain-containing protein. (367 aa)
	A0A3Q7JD65	Uncharacterized protein. (1003 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A3Q7G7L4	A0A3Q7GX73	TFIIS N-terminal domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.872
A0A3Q7G7L4	A0A3Q7JD65	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.451
A0A3Q7GBP4	A0A3Q7GX73	Uncharacterized protein.	TFIIS N-terminal domain-containing protein.	0.872
A0A3Q7GJ79	A0A3Q7GX73	TFIIS N-terminal domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.872
A0A3Q7GX73	A0A3Q7G7L4	TFIIS N-terminal domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.872
A0A3Q7GX73	A0A3Q7GBP4	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.872
A0A3Q7GX73	A0A3Q7GJ79	TFIIS N-terminal domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.872
A0A3Q7GX73	A0A3Q7IPW6	TFIIS N-terminal domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.872
A0A3Q7IJD6	A0A3Q7JD65	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.451
A0A3Q7ILS5	A0A3Q7JD65	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.451
A0A3Q7IPW6	A0A3Q7GX73	TFIIS N-terminal domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.872
A0A3Q7IPW6	A0A3Q7JD65	TFIIS N-terminal domain-containing protein.	Uncharacterized protein.	0.451
A0A3Q7JD65	A0A3Q7G7L4	Uncharacterized protein.	TFIIS N-terminal domain-containing protein.	0.451
A0A3Q7JD65	A0A3Q7IJD6	Uncharacterized protein.	TFIIS N-terminal domain-containing protein.	0.451
A0A3Q7JD65	A0A3Q7ILS5	Uncharacterized protein.	TFIIS N-terminal domain-containing protein.	0.451
A0A3Q7JD65	A0A3Q7IPW6	Uncharacterized protein.	TFIIS N-terminal domain-containing protein.	0.451

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