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LSM4 LSM4 A0A3Q7FQH0 A0A3Q7FQH0 A0A3Q7GL31 A0A3Q7GL31 A0A3Q7GZB2 A0A3Q7GZB2 A0A3Q7H2V6 A0A3Q7H2V6 A0A3Q7H5E5 A0A3Q7H5E5 LSM4-2 LSM4-2 A0A3Q7I6B1 A0A3Q7I6B1 A0A3Q7I9V8 A0A3Q7I9V8 A0A3Q7IJG1 A0A3Q7IJG1 A0A3Q7INH3 A0A3Q7INH3 A0A3Q7IPK6 A0A3Q7IPK6 A0A3Q7JFT1 A0A3Q7JFT1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (148 aa)
A0A3Q7FQH0Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
A0A3Q7GL31Small nuclear ribonucleoprotein G. (80 aa)
A0A3Q7GZB2Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
A0A3Q7H2V6U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A3Q7H5E5Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
LSM4-2U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (154 aa)
A0A3Q7I6B1Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
A0A3Q7I9V8G-patch domain-containing protein. (867 aa)
A0A3Q7IJG1Sm domain-containing protein. (90 aa)
A0A3Q7INH3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
A0A3Q7IPK6Small nuclear ribonucleoprotein G. (81 aa)
A0A3Q7JFT1Sm domain-containing protein. (88 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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