STRINGSTRING
rpoC2 rpoC2 A0A3Q7JYN7 A0A3Q7JYN7 K4AUR8_SOLLC K4AUR8_SOLLC K4AUT2_SOLLC K4AUT2_SOLLC K4AZY4_SOLLC K4AZY4_SOLLC K4BF30_SOLLC K4BF30_SOLLC K4CCX9_SOLLC K4CCX9_SOLLC K4CJ72_SOLLC K4CJ72_SOLLC K4CYR6_SOLLC K4CYR6_SOLLC K4D4Y7_SOLLC K4D4Y7_SOLLC K4D923_SOLLC K4D923_SOLLC K4DE50_SOLLC K4DE50_SOLLC K4DG82_SOLLC K4DG82_SOLLC K4DG84_SOLLC K4DG84_SOLLC rpoB rpoB rpoC1 rpoC1 A0A3Q7EC61 A0A3Q7EC61 A0A3Q7ECE6 A0A3Q7ECE6 A0A3Q7ECS0 A0A3Q7ECS0 A0A3Q7ECT7 A0A3Q7ECT7 A0A3Q7EHY9 A0A3Q7EHY9 A0A3Q7EPL3 A0A3Q7EPL3 A0A3Q7ES84 A0A3Q7ES84 A0A3Q7EX08 A0A3Q7EX08 A0A3Q7EZB3 A0A3Q7EZB3 A0A3Q7F0D1 A0A3Q7F0D1 A0A3Q7F4K2 A0A3Q7F4K2 A0A3Q7F5Y9 A0A3Q7F5Y9 A0A3Q7F7C1 A0A3Q7F7C1 A0A3Q7FP01 A0A3Q7FP01 A0A3Q7FQN8 A0A3Q7FQN8 A0A3Q7FTS5 A0A3Q7FTS5 A0A3Q7FYC5 A0A3Q7FYC5 A0A3Q7FZW2 A0A3Q7FZW2 A0A3Q7G2F0 A0A3Q7G2F0 A0A3Q7G3C5 A0A3Q7G3C5 A0A3Q7G4F6 A0A3Q7G4F6 A0A3Q7G5L2 A0A3Q7G5L2 A0A3Q7G7G9 A0A3Q7G7G9 A0A3Q7G7Y6 A0A3Q7G7Y6 A0A3Q7GIN7 A0A3Q7GIN7 A0A3Q7GK72 A0A3Q7GK72 A0A3Q7GL64 A0A3Q7GL64 A0A3Q7GN86 A0A3Q7GN86 A0A3Q7GPG9 A0A3Q7GPG9 A0A3Q7GSC8 A0A3Q7GSC8 A0A3Q7GTI8 A0A3Q7GTI8 A0A3Q7GTY0 A0A3Q7GTY0 A0A3Q7GY47 A0A3Q7GY47 A0A3Q7H2G3 A0A3Q7H2G3 A0A3Q7H2X4 A0A3Q7H2X4 A0A3Q7H6U5 A0A3Q7H6U5 A0A3Q7H7H6 A0A3Q7H7H6 A0A3Q7HAG0 A0A3Q7HAG0 A0A3Q7HIB6 A0A3Q7HIB6 A0A3Q7HIM8 A0A3Q7HIM8 A0A3Q7HJU4 A0A3Q7HJU4 A0A3Q7HK28 A0A3Q7HK28 A0A3Q7HK85 A0A3Q7HK85 A0A3Q7HKB3 A0A3Q7HKB3 A0A3Q7HL80 A0A3Q7HL80 A0A3Q7HMU3 A0A3Q7HMU3 A0A3Q7HMY9 A0A3Q7HMY9 A0A3Q7HU52 A0A3Q7HU52 A0A3Q7HUB7 A0A3Q7HUB7 A0A3Q7HVN0 A0A3Q7HVN0 A0A3Q7HVT2 A0A3Q7HVT2 A0A3Q7HXK3 A0A3Q7HXK3 A0A3Q7I0G6 A0A3Q7I0G6 A0A3Q7I1C9 A0A3Q7I1C9 A0A3Q7I3X0 A0A3Q7I3X0 A0A3Q7I5P0 A0A3Q7I5P0 A0A3Q7IAV3 A0A3Q7IAV3 A0A3Q7IAY0 A0A3Q7IAY0 A0A3Q7IDK2 A0A3Q7IDK2 RPB2 RPB2 A0A3Q7II19 A0A3Q7II19 A0A3Q7IKV6 A0A3Q7IKV6 A0A3Q7IME6 A0A3Q7IME6 A0A3Q7IPH3 A0A3Q7IPH3 A0A3Q7IQ33 A0A3Q7IQ33 A0A3Q7ITY2 A0A3Q7ITY2 A0A3Q7IVT7 A0A3Q7IVT7 A0A3Q7J2N2 A0A3Q7J2N2 RPB2-2 RPB2-2 A0A3Q7J5A0 A0A3Q7J5A0 A0A3Q7J700 A0A3Q7J700 A0A3Q7J7J2 A0A3Q7J7J2 A0A3Q7J7N1 A0A3Q7J7N1 A0A3Q7J7P6 A0A3Q7J7P6 A0A3Q7J8E0 A0A3Q7J8E0 A0A3Q7J8Y1 A0A3Q7J8Y1 A0A3Q7JE96 A0A3Q7JE96 A0A3Q7JJK5 A0A3Q7JJK5 A0A3Q7JLS3 A0A3Q7JLS3 A0A3Q7JPU4 A0A3Q7JPU4 A0A3Q7JUV2 A0A3Q7JUV2 A0A3Q7JXC6 A0A3Q7JXC6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpoC2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1392 aa)
A0A3Q7JYN7RNA_pol_Rpb1_5 domain-containing protein. (146 aa)
K4AUR8_SOLLCRNA_pol_Rpb1_1 domain-containing protein. (165 aa)
K4AUT2_SOLLCUncharacterized protein. (296 aa)
K4AZY4_SOLLCUncharacterized protein. (115 aa)
K4BF30_SOLLCRNA_pol_Rpb5_C domain-containing protein. (117 aa)
K4CCX9_SOLLCUncharacterized protein. (95 aa)
K4CJ72_SOLLCUncharacterized protein. (73 aa)
K4CYR6_SOLLCUncharacterized protein. (215 aa)
K4D4Y7_SOLLCUncharacterized protein. (136 aa)
K4D923_SOLLCUncharacterized protein. (130 aa)
K4DE50_SOLLCRNA_pol_Rpb2_3 domain-containing protein. (169 aa)
K4DG82_SOLLCUncharacterized protein. (112 aa)
K4DG84_SOLLCUncharacterized protein. (168 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1070 aa)
rpoC1DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC1 subfamily. (681 aa)
A0A3Q7EC61DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (123 aa)
A0A3Q7ECE6Uncharacterized protein. (142 aa)
A0A3Q7ECS0Uncharacterized protein. (91 aa)
A0A3Q7ECT7RPOLA_N domain-containing protein. (147 aa)
A0A3Q7EHY9Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (144 aa)
A0A3Q7EPL3CYCLIN domain-containing protein; Belongs to the cyclin family. (320 aa)
A0A3Q7ES84Uncharacterized protein. (639 aa)
A0A3Q7EX08Uncharacterized protein. (122 aa)
A0A3Q7EZB3Nuclear cap-binding protein subunit 2. (257 aa)
A0A3Q7F0D1RNA_pol_Rpb2_2 domain-containing protein. (78 aa)
A0A3Q7F4K2RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (453 aa)
A0A3Q7F5Y9Uncharacterized protein. (740 aa)
A0A3Q7F7C1Uncharacterized protein. (209 aa)
A0A3Q7FP01DUF4101 domain-containing protein. (830 aa)
A0A3Q7FQN8DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1212 aa)
A0A3Q7FTS5mRNA cap guanine-N7 methyltransferase. (384 aa)
A0A3Q7FYC5Uncharacterized protein. (291 aa)
A0A3Q7FZW2RNA_pol_Rpb2_2 domain-containing protein. (66 aa)
A0A3Q7G2F0Uncharacterized protein. (227 aa)
A0A3Q7G3C5Transcription elongation factor SPT5. (1046 aa)
A0A3Q7G4F6Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (145 aa)
A0A3Q7G5L2General transcription factor IIH subunit. (414 aa)
A0A3Q7G7G9MAT1 domain-containing protein. (188 aa)
A0A3Q7G7Y6CYCLIN domain-containing protein; Belongs to the cyclin family. (327 aa)
A0A3Q7GIN7SHS2_Rpb7-N domain-containing protein. (180 aa)
A0A3Q7GK72Uncharacterized protein. (543 aa)
A0A3Q7GL64Uncharacterized protein. (206 aa)
A0A3Q7GN86DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
A0A3Q7GPG9Uncharacterized protein. (207 aa)
A0A3Q7GSC8SANTA domain-containing protein. (411 aa)
A0A3Q7GTI8SHS2_Rpb7-N domain-containing protein. (93 aa)
A0A3Q7GTY0Uncharacterized protein. (120 aa)
A0A3Q7GY47Uncharacterized protein. (290 aa)
A0A3Q7H2G3Uncharacterized protein. (71 aa)
A0A3Q7H2X4Uncharacterized protein. (58 aa)
A0A3Q7H6U5RPOLA_N domain-containing protein. (205 aa)
A0A3Q7H7H6RPOLD domain-containing protein. (362 aa)
A0A3Q7HAG0Uncharacterized protein. (265 aa)
A0A3Q7HIB6Uncharacterized protein. (539 aa)
A0A3Q7HIM8Uncharacterized protein. (177 aa)
A0A3Q7HJU4Helicase ATP-binding domain-containing protein. (758 aa)
A0A3Q7HK28RNA_pol_Rpb2_2 domain-containing protein. (58 aa)
A0A3Q7HK85Uncharacterized protein. (56 aa)
A0A3Q7HKB3Uncharacterized protein. (209 aa)
A0A3Q7HL80Uncharacterized protein. (103 aa)
A0A3Q7HMU3DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (335 aa)
A0A3Q7HMY9Uncharacterized protein. (345 aa)
A0A3Q7HU52Uncharacterized protein. (534 aa)
A0A3Q7HUB7Uncharacterized protein. (1046 aa)
A0A3Q7HVN0mRNA cap guanine-N7 methyltransferase. (373 aa)
A0A3Q7HVT2RPOL4c domain-containing protein. (138 aa)
A0A3Q7HXK3SANTA domain-containing protein. (377 aa)
A0A3Q7I0G6Uncharacterized protein. (677 aa)
A0A3Q7I1C9Uncharacterized protein. (272 aa)
A0A3Q7I3X0Uncharacterized protein. (324 aa)
A0A3Q7I5P0Uncharacterized protein. (211 aa)
A0A3Q7IAV3Uncharacterized protein. (52 aa)
A0A3Q7IAY0Uncharacterized protein. (608 aa)
A0A3Q7IDK2RNA_pol_Rpb1_3 domain-containing protein. (113 aa)
RPB2DNA-directed RNA polymerase II subunit RPB2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB2 is [...] (1191 aa)
A0A3Q7II19TFIIF_beta domain-containing protein. (276 aa)
A0A3Q7IKV6Uncharacterized protein. (223 aa)
A0A3Q7IME6DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1219 aa)
A0A3Q7IPH3Uncharacterized protein. (70 aa)
A0A3Q7IQ33Uncharacterized protein. (1488 aa)
A0A3Q7ITY2Uncharacterized protein. (144 aa)
A0A3Q7IVT7Uncharacterized protein. (508 aa)
A0A3Q7J2N2Uncharacterized protein. (186 aa)
RPB2-2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1232 aa)
A0A3Q7J5A0MIF4G domain-containing protein. (861 aa)
A0A3Q7J700Uncharacterized protein. (51 aa)
A0A3Q7J7J2Uncharacterized protein. (130 aa)
A0A3Q7J7N1Uncharacterized protein. (54 aa)
A0A3Q7J7P6Uncharacterized protein. (56 aa)
A0A3Q7J8E0Uncharacterized protein. (56 aa)
A0A3Q7J8Y1Uncharacterized protein. (131 aa)
A0A3Q7JE96Uncharacterized protein. (593 aa)
A0A3Q7JJK5Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (537 aa)
A0A3Q7JLS3Uncharacterized protein. (149 aa)
A0A3Q7JPU4RNA_pol_L_2 domain-containing protein. (116 aa)
A0A3Q7JUV2Uncharacterized protein. (450 aa)
A0A3Q7JXC6Uncharacterized protein. (142 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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