STRINGSTRING
AFRR AFRR A0A3Q7EQU5 A0A3Q7EQU5 A0A3Q7EW61 A0A3Q7EW61 Actin Actin A0A3Q7GSL2 A0A3Q7GSL2 MDHAR MDHAR AFRR-2 AFRR-2 NIM1 NIM1 rbcL rbcL APX APX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFRRMonodehydroascorbate reductase; Catalyzes the conversion of monodehydroascorbate to ascorbate, oxidizing NADH in the process; Belongs to the FAD-dependent oxidoreductase family. (433 aa)
A0A3Q7EQU5Uncharacterized protein. (377 aa)
A0A3Q7EW61Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (252 aa)
ActinUncharacterized protein. (377 aa)
A0A3Q7GSL2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (228 aa)
MDHARPyr_redox_2 domain-containing protein. (491 aa)
AFRR-2Pyr_redox_2 domain-containing protein. (433 aa)
NIM1NPR1. (576 aa)
rbcLRibulose bisphosphate carboxylase large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. (477 aa)
APXAscorbate peroxidase; Belongs to the peroxidase family. (250 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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