STRINGSTRING
PSY1 PSY1 PG2 PG2 NAC-NOR NAC-NOR SGR1 SGR1 PSY2 PSY2 Dxs Dxs A0A3Q7EQU5 A0A3Q7EQU5 XTH5 XTH5 LeSPL-CNR LeSPL-CNR SlPL SlPL FUL2 FUL2 Actin Actin A0A3Q7GBV0 A0A3Q7GBV0 FUL1 FUL1 gst gst psy2 psy2 ALQ ALQ NAC4 NAC4 LeEXP1 LeEXP1 LE-ACS7 LE-ACS7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PSY1Phytoene synthase 1, chloroplastic; Catalyzes the reaction from prephytoene diphosphate to phytoene. (412 aa)
PG2Polygalacturonase-2; Catalytic subunit of the polygalacturonase isozyme 1 and 2 (PG1 and PG2). Acts in concert with the pectinesterase, in the ripening process. Is involved in cell wall metabolism, specifically in polyuronide degradation. The depolymerization and solubilization of cell wall polyuronides mediated by PG2 during ripening seems to be limited by the beta subunit GP1, probably by recruiting PG2 to form PG1. (457 aa)
NAC-NORNAC domain protein. (355 aa)
SGR1Protein STAY-GREEN 1, chloroplastic; Required to trigger chlorophyll degradation during leaf senescence and fruit ripening (Ref.3,. Binds directly PSY1 to regulate the accumulation of lycopene and beta-carotene in the maturing fruits. Belongs to the staygreen family. (272 aa)
PSY2Phytoene synthase 2, chloroplastic; Catalyzes the reaction from prephytoene diphosphate to phytoene; Belongs to the phytoene/squalene synthase family. (310 aa)
DxsTRANSKETOLASE_1 domain-containing protein. (730 aa)
A0A3Q7EQU5Uncharacterized protein. (377 aa)
XTH5GH16 domain-containing protein. (1484 aa)
LeSPL-CNRSBP-type domain-containing protein. (126 aa)
SlPLPectate lyase. (394 aa)
FUL2Uncharacterized protein. (247 aa)
ActinUncharacterized protein. (377 aa)
A0A3Q7GBV0Endoglucanase. (519 aa)
FUL1Uncharacterized protein. (245 aa)
gstGlutathione-S-transferase; Belongs to the GST superfamily. (224 aa)
psy2Phytoene synthase 2. (438 aa)
ALQMADS-box transcription factor ARLEQUIN. (269 aa)
NAC4NAC transcription factor. (329 aa)
LeEXP1Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily. (261 aa)
LE-ACS71-aminocyclopropane-1-carboxylate synthase 7. (467 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.