STRINGSTRING
GAPDH GAPDH ldh ldh HO1 HO1 A0A3Q7I4P2 A0A3Q7I4P2 A0A3Q7HNA9 A0A3Q7HNA9 A0A3Q7HD29 A0A3Q7HD29
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GAPDHGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (353 aa)
ldhL-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (350 aa)
HO1Heme oxygenase 1. (278 aa)
A0A3Q7I4P2Aspartate aminotransferase. (406 aa)
A0A3Q7HNA9Aspartate aminotransferase. (462 aa)
A0A3Q7HD29Aspartate aminotransferase. (425 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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