12 items (Solanum lycopersicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

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Your Input:
	A0A3Q7EZ34	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	A0A3Q7FFU8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)
	HSP90	HATPase_c domain-containing protein. (704 aa)
	A0A3Q7I980	Uncharacterized protein. (980 aa)
	CdkB1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (492 aa)
	AGO10	Uncharacterized protein; Belongs to the argonaute family. (950 aa)
	AGO7	AGO7; Belongs to the argonaute family. (1000 aa)
	THM18	THM18 protein. (265 aa)
	Q6XNM3_SOLLC	Non-specific serine/threonine protein kinase. (504 aa)
	MPK3	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (373 aa)
	cdkB2	B2-type cyclin dependent kinase; Belongs to the protein kinase superfamily. (315 aa)
	A0A3Q7F6Y5	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (132 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7EZ34	A0A3Q7F6Y5	A0A3Q7EZ34	A0A3Q7F6Y5	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
A0A3Q7EZ34	A0A3Q7FFU8	A0A3Q7EZ34	A0A3Q7FFU8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
A0A3Q7EZ34	A0A3Q7I980	A0A3Q7EZ34	A0A3Q7I980	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.996
A0A3Q7F6Y5	A0A3Q7EZ34	A0A3Q7F6Y5	A0A3Q7EZ34	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
A0A3Q7F6Y5	A0A3Q7FFU8	A0A3Q7F6Y5	A0A3Q7FFU8	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
A0A3Q7F6Y5	A0A3Q7I980	A0A3Q7F6Y5	A0A3Q7I980	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.996
A0A3Q7FFU8	A0A3Q7EZ34	A0A3Q7FFU8	A0A3Q7EZ34	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
A0A3Q7FFU8	A0A3Q7F6Y5	A0A3Q7FFU8	A0A3Q7F6Y5	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.543
A0A3Q7FFU8	A0A3Q7I980	A0A3Q7FFU8	A0A3Q7I980	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	Uncharacterized protein.	0.996
A0A3Q7I980	A0A3Q7EZ34	A0A3Q7I980	A0A3Q7EZ34	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.996
A0A3Q7I980	A0A3Q7F6Y5	A0A3Q7I980	A0A3Q7F6Y5	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.996
A0A3Q7I980	A0A3Q7FFU8	A0A3Q7I980	A0A3Q7FFU8	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.996
CdkB1	HSP90	A0A3Q7IID4	A0A3Q7HLX5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	HATPase_c domain-containing protein.	0.442
CdkB1	MPK3	A0A3Q7IID4	Q84MI4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.422
CdkB1	cdkB2	A0A3Q7IID4	Q9FSH4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	B2-type cyclin dependent kinase; Belongs to the protein kinase superfamily.	0.718
HSP90	CdkB1	A0A3Q7HLX5	A0A3Q7IID4	HATPase_c domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.442
HSP90	MPK3	A0A3Q7HLX5	Q84MI4	HATPase_c domain-containing protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.557
HSP90	cdkB2	A0A3Q7HLX5	Q9FSH4	HATPase_c domain-containing protein.	B2-type cyclin dependent kinase; Belongs to the protein kinase superfamily.	0.447
MPK3	CdkB1	Q84MI4	A0A3Q7IID4	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.422
MPK3	HSP90	Q84MI4	A0A3Q7HLX5	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	HATPase_c domain-containing protein.	0.557

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