45 items (Solanum lycopersicum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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protein homology

Your Input:
	A0A3Q7IPS6	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (462 aa)
	A0A3Q7J0Z4	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (447 aa)
	CIPK6	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (432 aa)
	A0A3Q7JB22	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (462 aa)
	A0A3Q7JCA7	RING-type E3 ubiquitin transferase. (645 aa)
	MCA1	Metacaspase. (416 aa)
	K4CLE8_SOLLC	Uncharacterized protein. (463 aa)
	K4CLD8_SOLLC	Uncharacterized protein. (149 aa)
	GAI	DELLA protein GAI; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). Its degradation is not essential for germination. Belongs to the GRAS family. DELLA subfamily. (588 aa)
	TUB	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	CYP	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (171 aa)
	K4CIV6_SOLLC	UBC9; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	LeEF-1	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (448 aa)
	K4BAM5_SOLLC	UBC29; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	MCA2	Metacaspase 2. (362 aa)
	A0A1S6KM66	UBC38; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	A0A3Q7EJD0	zf-LSD1 domain-containing protein. (369 aa)
	A0A3Q7FHB4	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (445 aa)
	ACT	Uncharacterized protein. (377 aa)
	A0A3Q7FS62	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1105 aa)
	HMGS	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (462 aa)
	gst	Glutathione-S-transferase; Belongs to the GST superfamily. (224 aa)
	A0A3Q7JYN3	Uncharacterized protein. (459 aa)
	A0A3Q7JY51	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	THM16	Uncharacterized protein. (309 aa)
	A0A3Q7JGP1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (446 aa)
	A0A3Q7JDI3	Chitin-binding type-1 domain-containing protein. (322 aa)
	A0A3Q7FU39	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (443 aa)
	A0A3Q7G0Q2	Uncharacterized protein; Belongs to the cytochrome P450 family. (501 aa)
	A0A3Q7G3G2	Uncharacterized protein. (202 aa)
	A0A3Q7GBA2	zf-LSD1 domain-containing protein. (361 aa)
	A0A3Q7GCE5	Uncharacterized protein. (466 aa)
	A0A3Q7GKP5	AP2/ERF domain-containing protein. (217 aa)
	A0A3Q7GNR8	zf-LSD1 domain-containing protein. (362 aa)
	A0A3Q7GRM6	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	A0A3Q7GVP0	Uncharacterized protein. (439 aa)
	A0A3Q7H6Z8	Uncharacterized protein. (461 aa)
	A0A3Q7HIK0	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1082 aa)
	A0A3Q7HN40	Uncharacterized protein. (483 aa)
	A0A3Q7HN49	Uncharacterized protein. (789 aa)
	A0A3Q7HQK9	Uncharacterized protein. (475 aa)
	PR-5	Uncharacterized protein. (614 aa)
	A0A3Q7HUM0	AP2/ERF domain-containing protein. (322 aa)
	A0A3Q7IJQ2	Uncharacterized protein. (471 aa)
	A0A3Q7IPL2	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7FHB4	ACT	A0A3Q7FHB4	A0A3Q7FJJ3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.561
A0A3Q7FU39	ACT	A0A3Q7FU39	A0A3Q7FJJ3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.583
A0A3Q7GRM6	ACT	A0A3Q7GRM6	A0A3Q7FJJ3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.559
A0A3Q7H6Z8	A0A3Q7JYN3	A0A3Q7H6Z8	A0A3Q7JYN3	Uncharacterized protein.	Uncharacterized protein.	0.700
A0A3Q7IPL2	ACT	A0A3Q7IPL2	A0A3Q7FJJ3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.471
A0A3Q7IPS6	A0A3Q7JB22	A0A3Q7IPS6	A0A3Q7JB22	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.900
A0A3Q7IPS6	HMGS	A0A3Q7IPS6	A9LRT6	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.900
A0A3Q7J0Z4	CYP	A0A3Q7J0Z4	P21568	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.602
A0A3Q7J0Z4	LeEF-1	A0A3Q7J0Z4	P17786	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.	0.900
A0A3Q7J0Z4	TUB	A0A3Q7J0Z4	Q38MV0	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.745
A0A3Q7JB22	A0A3Q7IPS6	A0A3Q7JB22	A0A3Q7IPS6	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.900
A0A3Q7JB22	HMGS	A0A3Q7JB22	A9LRT6	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.900
A0A3Q7JDI3	PR-5	A0A3Q7JDI3	A0A3Q7HTH3	Chitin-binding type-1 domain-containing protein.	Uncharacterized protein.	0.561
A0A3Q7JGP1	ACT	A0A3Q7JGP1	A0A3Q7FJJ3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.559
A0A3Q7JY51	ACT	A0A3Q7JY51	A0A3Q7FJJ3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.584
A0A3Q7JYN3	A0A3Q7H6Z8	A0A3Q7JYN3	A0A3Q7H6Z8	Uncharacterized protein.	Uncharacterized protein.	0.700
ACT	A0A3Q7FHB4	A0A3Q7FJJ3	A0A3Q7FHB4	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.561
ACT	A0A3Q7FU39	A0A3Q7FJJ3	A0A3Q7FU39	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.583
ACT	A0A3Q7GRM6	A0A3Q7FJJ3	A0A3Q7GRM6	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.559
ACT	A0A3Q7IPL2	A0A3Q7FJJ3	A0A3Q7IPL2	Uncharacterized protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.471

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