(27 nodes) (2023) High-temperature stress in crops: male sterility, yield loss and potential remedy approaches. network (Solanum lycopersicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	K4AYB8_SOLLC	Uncharacterized protein. (425 aa)
	TAPG1	Uncharacterized protein. (1126 aa)
	LeSPL-CNR	SBP-type domain-containing protein. (126 aa)
	BHLH1	BHLH domain-containing protein. (330 aa)
	PS-2	Uncharacterized protein. (476 aa)
	XOPG1	Uncharacterized protein. (457 aa)
	A0A3Q7GNI2	Uncharacterized protein. (410 aa)
	A0A3Q7HJ28	Uncharacterized protein. (611 aa)
	PGcat	Uncharacterized protein. (386 aa)
	GPAT	Glycerol-3-phosphate acyltransferase, chloroplastic; Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate. The enzyme from chilling-resistant plants discriminates against non-fluid palmitic acid and selects oleic acid whereas the enzyme from sensitive plants accepts both fatty acids. Belongs to the GPAT/DAPAT family. (470 aa)
	A0A3Q7IN05	Uncharacterized protein; Belongs to the GRAS family. (1017 aa)
	ARF17	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (622 aa)
	ARF10	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (699 aa)
	A0A3Q7J5M0	Uncharacterized protein. (395 aa)
	A0A3Q7J698	Uncharacterized protein. (396 aa)
	A0A3Q7J6B7	Uncharacterized protein. (746 aa)
	A0A3Q7J6V2	Uncharacterized protein. (395 aa)
	TPG6	Uncharacterized protein. (763 aa)
	A0A3Q7JS77	Uncharacterized protein. (234 aa)
	HSFA3	Heat stress transcription factor A3. (506 aa)
	AOS1	Allene oxide synthase 1, chloroplastic; Cytochrome P450 of the CYP74A subfamily involved in the biosynthesis of jasmonic acid from lipoxygenase-derived hydroperoxides of free fatty acids. Catalyzes the synthesis of unstable allene oxide, which is further converted spontaneously by hydrolysis or cyclization. Can use 13S-hydroperoxy-9(Z),11(E),15(Z)-octadecatrienoic acid (13- HPOT) and 13S-hydroperoxy-9(Z),11(E)-octadecadienoic acid (13-HPOD) as substrates. (534 aa)
	K4CJ84_SOLLC	Uncharacterized protein. (395 aa)
	TAPG5	Polygalacturonase 5. (387 aa)
	PG2	Polygalacturonase-2; Catalytic subunit of the polygalacturonase isozyme 1 and 2 (PG1 and PG2). Acts in concert with the pectinesterase, in the ripening process. Is involved in cell wall metabolism, specifically in polyuronide degradation. The depolymerization and solubilization of cell wall polyuronides mediated by PG2 during ripening seems to be limited by the beta subunit GP1, probably by recruiting PG2 to form PG1. (457 aa)
	THM18	THM18 protein. (265 aa)
	GAI	DELLA protein GAI; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). Its degradation is not essential for germination. Belongs to the GRAS family. DELLA subfamily. (588 aa)
	Q9ZT65_SOLLC	Polygalacturonase 7. (397 aa)

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q7GNI2	A0A3Q7HJ28	A0A3Q7GNI2	A0A3Q7HJ28	Uncharacterized protein.	Uncharacterized protein.	0.673
A0A3Q7GNI2	A0A3Q7J5M0	A0A3Q7GNI2	A0A3Q7J5M0	Uncharacterized protein.	Uncharacterized protein.	0.677
A0A3Q7GNI2	A0A3Q7J698	A0A3Q7GNI2	A0A3Q7J698	Uncharacterized protein.	Uncharacterized protein.	0.677
A0A3Q7GNI2	A0A3Q7J6B7	A0A3Q7GNI2	A0A3Q7J6B7	Uncharacterized protein.	Uncharacterized protein.	0.673
A0A3Q7GNI2	A0A3Q7J6V2	A0A3Q7GNI2	A0A3Q7J6V2	Uncharacterized protein.	Uncharacterized protein.	0.676
A0A3Q7GNI2	A0A3Q7JS77	A0A3Q7GNI2	A0A3Q7JS77	Uncharacterized protein.	Uncharacterized protein.	0.670
A0A3Q7GNI2	K4AYB8_SOLLC	A0A3Q7GNI2	K4AYB8	Uncharacterized protein.	Uncharacterized protein.	0.677
A0A3Q7GNI2	K4CJ84_SOLLC	A0A3Q7GNI2	K4CJ84	Uncharacterized protein.	Uncharacterized protein.	0.678
A0A3Q7GNI2	PG2	A0A3Q7GNI2	P05117	Uncharacterized protein.	Polygalacturonase-2; Catalytic subunit of the polygalacturonase isozyme 1 and 2 (PG1 and PG2). Acts in concert with the pectinesterase, in the ripening process. Is involved in cell wall metabolism, specifically in polyuronide degradation. The depolymerization and solubilization of cell wall polyuronides mediated by PG2 during ripening seems to be limited by the beta subunit GP1, probably by recruiting PG2 to form PG1.	0.679
A0A3Q7GNI2	PGcat	A0A3Q7GNI2	A0A3Q7HP53	Uncharacterized protein.	Uncharacterized protein.	0.679
A0A3Q7GNI2	PS-2	A0A3Q7GNI2	A0A3Q7G1T5	Uncharacterized protein.	Uncharacterized protein.	0.680
A0A3Q7GNI2	Q9ZT65_SOLLC	A0A3Q7GNI2	Q9ZT65	Uncharacterized protein.	Polygalacturonase 7.	0.675
A0A3Q7GNI2	TAPG1	A0A3Q7GNI2	A0A3Q7F0E4	Uncharacterized protein.	Uncharacterized protein.	0.675
A0A3Q7GNI2	TAPG5	A0A3Q7GNI2	O22313	Uncharacterized protein.	Polygalacturonase 5.	0.674
A0A3Q7GNI2	TPG6	A0A3Q7GNI2	A0A3Q7JCY2	Uncharacterized protein.	Uncharacterized protein.	0.675
A0A3Q7HJ28	A0A3Q7GNI2	A0A3Q7HJ28	A0A3Q7GNI2	Uncharacterized protein.	Uncharacterized protein.	0.673
A0A3Q7HJ28	XOPG1	A0A3Q7HJ28	A0A3Q7GHE7	Uncharacterized protein.	Uncharacterized protein.	0.672
A0A3Q7IN05	BHLH1	A0A3Q7IN05	A0A3Q7FNJ7	Uncharacterized protein; Belongs to the GRAS family.	BHLH domain-containing protein.	0.454
A0A3Q7IN05	GAI	A0A3Q7IN05	Q7Y1B6	Uncharacterized protein; Belongs to the GRAS family.	DELLA protein GAI; Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). Its degradation is not essential for germination. Belongs to the GRAS family. DELLA subfamily.	0.904
A0A3Q7IN05	LeSPL-CNR	A0A3Q7IN05	A0A3Q7F4A8	Uncharacterized protein; Belongs to the GRAS family.	SBP-type domain-containing protein.	0.459

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