STRINGSTRING
SlMYB117 SlMYB117 K4D336_SOLLC K4D336_SOLLC AN2 AN2 LAPA1 LAPA1 DFRA_SOLLC DFRA_SOLLC CHS2 CHS2 CHS1 CHS1 THM18 THM18 AADC2 AADC2 MYC1 MYC1 F3H F3H CHI1 CHI1 4CL 4CL CHS2-2 CHS2-2 CHS1-2 CHS1-2 gst gst MYB12 MYB12
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SlMYB117R2R3 MYB. (417 aa)
K4D336_SOLLCR2R3 MYB transcription factor. (270 aa)
AN2MYB transcriptional factor. (275 aa)
LAPA1Leucine aminopeptidase 1, chloroplastic; Presumably involved in the processing and regular turnover of intracellular proteins. (571 aa)
DFRA_SOLLCDihydroflavonol 4-reductase; Bifunctional enzyme involved in flavonoid metabolism. (379 aa)
CHS2Chalcone synthase 2; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. (389 aa)
CHS1Chalcone synthase 1; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. (389 aa)
THM18THM18 protein. (265 aa)
AADC2Aromatic amino acid decarboxylase 2. (465 aa)
MYC1Transcription factor MYC1; Transcriptional activator that binds to the G-box motif (5'- AACGTG-3') found in a number of promoters of jasmonate-induced genes. Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes. Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation. Acts synergistically with EOT1 in the transactivation of TPS5. Involved in type VI glandular trichome development. Involved in the activation of terpene synthases required for volatile mono- and sesquiterpenes synthesis by the [...] (630 aa)
F3HFe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (362 aa)
CHI1Chalcone-flavonone isomerase family protein; Belongs to the chalcone isomerase family. (204 aa)
4CLUncharacterized protein. (699 aa)
CHS2-2Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
CHS1-2Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
gstGlutathione-S-transferase; Belongs to the GST superfamily. (224 aa)
MYB12Myb 12 transcription factor. (338 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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