STRINGSTRING
ABI3 ABI3 SlIPT2 SlIPT2 SlIPT4 SlIPT4 ARF10 ARF10 TCP3 TCP3 CYP707A1 CYP707A1 CYP707A2 CYP707A2 THM18 THM18 DCL DCL AREB AREB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABI3TF-B3 domain-containing protein. (579 aa)
SlIPT2Uncharacterized protein. (325 aa)
SlIPT4Uncharacterized protein. (314 aa)
ARF10Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (699 aa)
TCP3TCP domain-containing protein. (442 aa)
CYP707A1Abscisic acid 8'-hydroxylase CYP707A1; Involved in the oxidative degradation of abscisic acid, especially in pollinated ovaries; Belongs to the cytochrome P450 family. (476 aa)
CYP707A2Abscisic acid 8'-hydroxylase CYP707A2; Negative regulator of fruit ripening involved in the oxidative degradation of abscisic acid (ABA). (469 aa)
THM18THM18 protein. (265 aa)
DCLProtein DCL, chloroplastic; Has a function in the early stage of chloroplast development and palisade cell morphogenesis. Required for correct plastid ribosome assembly. Required for processing and maturation of 4.5S rRNA. (224 aa)
AREBAREB-like protein. (447 aa)
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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