STRINGSTRING
LOC104217779 LOC104217779 LOC104221904 LOC104221904 LOC104231912 LOC104231912 LOC104232453 LOC104232453 LOC104234642 LOC104234642 LOC104239040 LOC104239040 LOC104235329 LOC104235329 LOC104243924 LOC104243924 LOC104248984 LOC104248984 LOC104246549 LOC104246549 LOC104247706 LOC104247706
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC104217779Transcriptional adapter. (525 aa)
LOC104221904SAGA-associated factor 29 homolog isoform X1. (268 aa)
LOC104231912Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (111 aa)
LOC104232453SAGA-associated factor 11. (176 aa)
LOC104234642Histone acetyltransferase GCN5 isoform X1. (538 aa)
LOC104239040Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (601 aa)
LOC104235329Uncharacterized protein LOC104235329. (354 aa)
LOC104243924Ubiquitinyl hydrolase 1. (552 aa)
LOC104248984Transcriptional adapter. (563 aa)
LOC104246549TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1. (702 aa)
LOC104247706Uncharacterized protein LOC104247706 isoform X1. (601 aa)
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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