STRINGSTRING
LOC104210179 LOC104210179 LOC104210726 LOC104210726 LOC104213879 LOC104213879 LOC104216019 LOC104216019 LOC104215536 LOC104215536 LOC104221046 LOC104221046 LOC104232942 LOC104232942 LOC104228617 LOC104228617 LOC104235043 LOC104235043 LOC104238014 LOC104238014 LOC104246597 LOC104246597
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC104210179Protein prenyltransferase alpha subunit repeat-containing protein 1. (422 aa)
LOC104210726Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. (444 aa)
LOC104213879Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (313 aa)
LOC104216019Ras-related protein RABH1e. (207 aa)
LOC104215536Rab proteins geranylgeranyltransferase component A 2-like. (311 aa)
LOC104221046Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (324 aa)
LOC104232942Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. (444 aa)
LOC104228617Geranylgeranyl transferase type-2 subunit alpha isoform X1. (704 aa)
LOC104235043Ras-related protein RABF1. (200 aa)
LOC104238014Ras-related protein RABH1b. (208 aa)
LOC104246597Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. (551 aa)
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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